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Analysis of the phylogenetic position of Pseudexorchis Yamaguti, 1938 (Digenea: Opisthorchioidea) suggests new complexity in the relationships of the Cryptogonimidae

Published online by Cambridge University Press:  28 October 2026

S.G. Sokolov
Affiliation:
A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia MSU-SakhalinTech Biodiversity Research Laboratory, Sakhalin State University, Yuzhno-Sakhalinsk, Russia
M. Urabe
Affiliation:
Department of Ecosystem Studies, Faculty of Environmental Science, the University of Shiga Prefecture, Hikone, Shiga, Japan
D.M. Atopkin*
Affiliation:
Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch of Russian Academy of Sciences, Vladivostok, Russia
*
Corresponding author: D.M. Atopkin; Email: atopkin@biosoil.ru
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Abstract

Pseudexorchis Yamaguti, 1938 is a genus of opisthorchioid digeneans, which is currently classified as a member of the Heterophyidae. Only one species is recognised in this genus, Pseudexorchis major (Hasegawa, 1935), which parasitises freshwater silurid fishes as adults. The aim of this study is to evaluate the family affiliation of Pseudexorchis based on phylogenetic data. We obtained the sequences of several genetic markers from a single adult specimen of P. major ex Silurus asotus Linnaeus, 1758 from Japan, which allowed us to identify it as a member of a phylogenetic lineage previously named by Miura and Takisawa (2024) as Type B. The lineage Type B appeared as a sister to P. major Type A of Miura and Takisawa (2024). The degree of genetic differentiation between Type B and Type A, mainly based on the cox1 gene partial sequence, allows us to hypothesise the species status of these lineages. The trees based on 28S rRNA, 28S rRNA + ITS2, and ITS1–5.8S–ITS2 datasets were most informative for phylogenetic inferences. In our analyses, Pseudexorchis was clustered with cryptogonimids Acanthostomum yahuarcaquense Cajiao-Mora and Bullard in Cajiao-Mora, Brule, Dutton, Caicedo-Portilla, and Bullard, 2025, Neocladocystis spp., Tanganyikatrema spp., and the nonugens KC489791 and KC489792 (28S rRNA-tree), or only A. yahuarcaquense (28S rRNA + ITS2-tree), or Acanthostomum cf. americanum (Pérez-Vigueras, 1956) (ITS1–5.8S–ITS2-tree); the clade of these species was closer to the clade formed by opisthorchids and heterophyids than to other cryptogonimids. Thus, the presented data do not support the hypothesis that Pseudexorchis belongs to the Heterophyidae and demonstrate paraphyly of the Cryptogonimidae.

Information

Type
Research Paper
Copyright
© The Author(s), 2026. Published by Cambridge University Press
Figure 0

Figure 1. Photographs of a voucher specimen of Pseudexorchis major ex Silurus asotus, Japan. (A) Whole body ventral view. (B–D) Fragments of body with optical focus on individual organs. Abbreviations: os, oral sucker; ov, ovary; rs, canalicular seminal receptacle; sv, bipartite seminal vesicle; t, testes; vi, ventral invagination; vs, ventral sucker; vt, vitellarium. Scale bars: 20 μm.Figure 1. long description.

Figure 1

Figure 2. Position of the newly collected isolate within the Pseudexorchis major clade from the Bayesian phylogenetic tree based on mitochondrial DNA cox1 gene partial sequences (full tree in Supplementary material: Figure S1). Posterior probability values lower than 0.9 are not shown. Newly collected isolate highlighted in bold.Figure 2. long description.

Figure 2

Figure 3. Phylogenetic position of the newly collected isolate of Pseudexorchis major reconstructed with the Bayesian inference algorithm based on ITS1–5.8S–ITS2 rDNA sequences. Posterior probability values lower than 0.9 are not shown. Newly collected isolate highlighted in bold.Figure 3. long description.

Figure 3

Figure 4. Phylogenetic position of the newly collected isolate of Pseudexorchis major reconstructed with the Bayesian inference algorithm based on partial 28S rRNA gene sequences. Posterior probability values lower than 0.9 are not shown. Newly collected isolate highlighted in bold.Figure 4. long description.

Figure 4

Figure 5. Phylogenetic position of the newly collected isolate of Pseudexorchis major reconstructed with the Bayesian inference algorithm based on concatenated 28S rRNA + ITS2 rDNA sequence dataset. Posterior probability values lower than 0.9 are not shown. Newly collected isolate highlighted in bold.Figure 5. long description.

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