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Binding of DNA to Natural Sepiolite: Applications in Biotechnology and Perspectives

Published online by Cambridge University Press:  01 January 2024

Sandrine Ragu
Affiliation:
Université de Paris, INSERM U1016, UMR 8104 CNRS, Institut Cochin, Equipe Labellisée Ligue Contre le Cancer, Paris, France
Olivier Piétrement
Affiliation:
Laboratoire Interdisciplinaire Carnot de Bourgogne, CNRS UMR 6303, Université de Bourgogne, 9 Avenue Alain Savary, 21078 Dijon Cedex, France
Bernard S. Lopez*
Affiliation:
Université de Paris, INSERM U1016, UMR 8104 CNRS, Institut Cochin, Equipe Labellisée Ligue Contre le Cancer, Paris, France
*
*E-mail address of corresponding author: bernard.lopez@inserm.fr
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Abstract

DNA manipulation is crucial for many biotechnological prospects and for medical applications such as gene therapy. This requires the amplification and extraction of DNA from bacteria and the transfer of these DNA molecules into cells, including bacterial and mammalian cells. The capacity of the natural magnesium silicate clay mineral sepiolite to bind to DNA makes it a potentially useful tool for biotechnological/medical strategies. In addition, sepiolite is inexpensive and classified as non-toxic and non-carcinogenic. This review will first describe the physicochemical interactions between sepiolite and DNA. Then, the leverage of sepiolite/DNA interactions for DNA extraction from bacteria, to optimize DNA transfer into bacteria and DNA transfection into mammalian cells, are presented. Finally, the putative toxicity of sepiolite and its advantages and perspectives for future prospects, such as the improvement of immunotherapy, are also discussed.

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Type
Article
Copyright
Copyright © The Clay Minerals Society 2021
Figure 0

Fig. 1. Sepiolite structure (adapted from Brauner and Preisinger, 1956)

Figure 1

Fig. 2. a The effects of the presence of cations with various valences on DNA adsorption. Reaction conditions: 10 mM Tris-HCl pH 7.5, salmon sperm DNA and sepiolite concentrations of 615 ng/μL and 1 mg/mL, respectively (from Castro-Smirnov et al., 2016). TEM images of DNA condensed with b spermidine and c the interaction with sepiolite fibers. Transmission electron microscopy (TEM) imaging: DNA molecules (5 nM) were condensed in 10 mM Tris-HCl pH 8, 50 mM NaCl, and 1 mM spermidine. 5 μL of reaction mixture was deposited onto a 600 mesh copper grid coated with a thin carbon film previously activated by glow discharge in the presence of 1-aminopentane (Merck, Saint Quentin Fallavier, France) (Dupaigne et al., 2018). After 1 min, the grids were washed with aqueous 2 wt.% uranyl acetate (Merck, Saint Quentin Fallavier, France) and then dried with ashless filter paper (VWR, Rosny sous bois, France). TEM observations were carried out using Zeiss 912AB transmission electron microscope in bright field mode. Electron micrographs were obtained using a ProScan 1024 HSC digital camera and iTEM software (Olympus, Soft Imaging Solutions, Munster, Germany)