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Mesoscopic models for electrohydrodynamic interactions of polyelectrolytes

Published online by Cambridge University Press:  16 March 2021

Dmitry I. Kopelevich*
Affiliation:
Department of Chemical Engineering, University of Florida, Gainesville, FL 32611-6005, USA
Shujun He
Affiliation:
Department of Chemical Engineering, University of Florida, Gainesville, FL 32611-6005, USA
Ryan J. Montes
Affiliation:
Department of Chemical Engineering, University of Florida, Gainesville, FL 32611-6005, USA
Jason E. Butler
Affiliation:
Department of Chemical Engineering, University of Florida, Gainesville, FL 32611-6005, USA
*
†Email address for correspondence: dkopelevich@che.ufl.edu

Abstract

Two mean-field models for polyelectrolytes in simultaneous electric field and pressure-driven flow field were developed and compared. The models predict migration perpendicular to the anti-parallel or parallel fields, where the migration is caused by electrohydrodynamic interactions calculated using either a short- or long-range approximation. Inputs for the mean-field models were determined from Brownian dynamics simulations in a simple shear flow. Both models qualitatively reproduce experimental observations of DNA focusing as reported in previous publications. Specifically, it is observed that combination of the shear and electric fields leads to polyelectrolyte motion in the direction transverse to the flow and electric field direction, which in turn leads to concentration of the polyelectrolyte in the centre of a microfluidic channel. Furthermore, both models predict that there is an optimal strength of electric field that leads to the narrowest distribution profile of the polyelectrolyte in the centre of the channel. The analysis suggests that this is due to dispersion induced by the electrohydrodynamic interactions. However, quantitative disagreement between the model predictions and the experimental data indicates that further progress in the model development is needed.

Information

Type
JFM Papers
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
Copyright
© The Author(s), 2021. Published by Cambridge University Press
Figure 0

Figure 1. (a) Applying an electric field $\boldsymbol {E}$ anti-parallel to a pressure-driven flow (blue) causes an initially uniform distribution of DNA, which is negatively charged, to lead the flow (red) and migrate towards the centre of the channel (grey field). The width of the concentration profile (green) is characterized by the standard deviation $\sigma (x)$ corresponding to the concentration profile $C(y|x)$ at position $x$. (b) Dependence of widths $\sigma ^\infty =\sigma (x \rightarrow \infty )$ of the developed concentration profiles of DNA molecules in a microfluidic channel on the electric field $E$ obtained in the experiments of Arca et al. (2015) for several mean shear rates $\bar {\gamma }$ and Debye lengths $\lambda _D$. The normalization for the axes was chosen to collapse the data onto a single curve.

Figure 1

Table 1. Dimensionless values of the parameters of the $\lambda$-DNA model that are kept constant throughout this work.

Figure 2

Figure 2. Mean transverse velocity $V_{c,y}$ in simple shear flows with rate $\gamma$. The results were obtained from Brownian dynamics simulations using (a) long-range and (b) short-range models for the electrohydrodynamic interactions. The velocities are normalized by the strength of the electric field $\mathcal {E}_m$ to facilitate discussion of the effects of $\mathcal {E}_m$ on $V_{c,y}$.

Figure 3

Figure 3. Structural properties of the polymer in a simple shear flow obtained from Brownian dynamics simulations. The root-mean-squared end-to-end distance $\langle R^2 \rangle ^{1/2}$ is shown for the (a) long- and (b) short-range electrohydrodynamic models. The normalized covariance $\varSigma _{xy} = \langle R_x R_y\rangle /\langle R^2 \rangle$ of the $x$ and $y$ components of the end-to-end vector $\boldsymbol {R}$ are also shown for the (c) long- and (d) short-range models. Data are shown as a function of shear rate $\gamma$ and electric field $\mathcal {E}_m$.

Figure 4

Figure 4. Power-law exponents $p$ and $q$ for the empirical relationships (3.1) and (3.2) describing the effect of the strength of the electric field $\mathcal {E}_m$ on the velocity $V_{c,y}$ and the diffusivity $D_{yy}$ in the transverse direction predicted by the long-range (LR) and short-range (SR) electrohydrodynamic models.

Figure 5

Figure 5. Contribution of electrohydrodynamic dispersion to polymer diffusivity in the $y$ direction in the simple shear flow obtained from Brownian dynamics simulations using (a) long-range and (b) short-range models. The dashed lines show fits of the data to the empirical relationship (3.2).

Figure 6

Figure 6. Concentration profiles in a 2-D pressure-driven flow at various positions $x$ along the channel obtained by the Brownian dynamics simulations with uniform initial conditions. The results were generated using the long-range model with $\mathcal {E}_{L} = 9.41$ and $\bar {\gamma } = 0.146$. Positions $x \ge 10^5$ correspond to the fully developed profile. The profiles are normalized so that $\int C(y)\,{\textrm {d}y} = 1$.

Figure 7

Figure 7. Dependence of widths $\sigma$ of the concentration profiles on position $x$ along the channel in 2-D pressure-driven flows. The data were obtained by the Brownian dynamics simulations (solid lines) and the mean-field model (dashed lines) at $\bar {\gamma } = 0.146$ using (a) long-range and (b) short-range approximations. The inset in (b) shows a magnified area corresponding to developed profiles for $\mathcal {E}_{S} = 6.15$, 12.30 and 16.40.

Figure 8

Figure 8. Widths ($\sigma ^\infty$) of the developed profiles in 2-D and 3-D pressure-driven flows with mean shear rate $\bar {\gamma } = 0.146$ in channels of width $H = 413$ obtained using the mean-field model for the long-range (LR) and short-range (SR) approximations of the electrohydrodynamic interactions. The asterisks and crosses indicate the approximate solutions (3.9) of the 2-D mean-field model.

Figure 9

Figure 9. Ratio $R = V_{c,y}/D_{yy}$ of the transverse velocity and diffusivity in a simple shear flow. The ratio $R$ was obtained from the Brownian dynamics simulations using (a) long-range and (b) short-range models.

Figure 10

Figure 10. Effect of the mean shear rate $\bar {\gamma }$ on the width $\sigma ^\infty$ of the developed concentration profile in a 2-D pressure-driven flow predicted by the mean-field model for the long-range (LR) and short-range (SR) approximations of the electrohydrodynamic interactions. The dashed lines show results of a fit of $\sigma ^\infty (\bar {\gamma })$ to $\sigma _0\bar {\gamma }^{-1/2}$ ($\sigma _0$ is a constant).

Figure 11

Figure 11. Schematic of contributions of individual terms of (4.1) to $R^{-1}$. The contributions of the Brownian force ($R_B = (D^B_{yy}/\hat {V}_{c,y})\mathcal {E}_m^{-p}$) and the electrohydrodynamic dispersion ($R_E = (D^E_{yy}/\hat {V}_{c,y})\mathcal {E}_m^{q-p}$) are shown by the blue dashed and red dash-dotted lines, respectively. The solid black line is $R^{-1}$ and the optimal electric field $\mathcal {E}_m^*$ is shown by the filled circle. The dotted lines show the effect of increasing the magnitude of the electrohydrodynamic dispersion relative to the electrohydrodynamic drift (the green and black dotted lines show new $R_E$ and $R^{-1}$, respectively, and the open circle shows new $\mathcal {E}_m^*$).

Figure 12

Table 2. Comparison of the optimal electric fields obtained from experiment (Arca et al.2015) and the combination of the Brownian dynamics simulations with the mean-field analysis. Here $E^*_{exp}$, $E^*_L$ and $E^*_S$ denote the optimal electric fields obtained, respectively, from the experiment and the analysis with the long- and short-range models. The electric field is normalized by the characteristic electric field $k_BT/be = 1305\ \textrm {V}\ \textrm {cm}^{-1}$.

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