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Derivation and external validation of a prediction model for pneumococcal urinary antigen test positivity in patients with community-acquired pneumonia

Published online by Cambridge University Press:  06 October 2023

Priscilla Kim
Affiliation:
Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, OH, USA
Michael B. Rothberg
Affiliation:
Center for Value-Based Care Research, Primary Care Institute, Cleveland Clinic, Cleveland, OH, USA
Amy S. Nowacki
Affiliation:
Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, OH, USADepartment of Quantitative Health Sciences, Cleveland Clinic, Cleveland, OH, USA
Pei-Chun Yu
Affiliation:
Vaccine and Infectious Disease and Public Health Sciences Divisions, Fred Hutch Cancer Research Center, Seattle, WA, USA
David Gugliotti
Affiliation:
Department of Hospital Medicine, Cleveland Clinic, Cleveland, OH, USA
Abhishek Deshpande*
Affiliation:
Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, OH, USACenter for Value-Based Care Research, Primary Care Institute, Cleveland Clinic, Cleveland, OH, USADepartment of Infectious Diseases, Cleveland Clinic, Cleveland, OH, USA
*
Corresponding author: Abhishek Deshpande; Email: deshpaa2@ccf.org

Abstract

Objective:

Derive and externally validate a prediction model for pneumococcal urinary antigen test (pUAT) positivity.

Methods:

Retrospective cohort study of adults admitted with community-acquired pneumonia (CAP) to 177 U.S. hospitals in the Premier Database (derivation and internal validation samples) or 12 Cleveland Clinic hospitals (external validation sample). We utilized multivariable logistic regression to predict pUAT positivity in the derivation dataset, followed by model performance evaluation in both validation datasets. Potential predictors included demographics, comorbidities, clinical findings, and markers of disease severity.

Results:

Of 198,130 Premier patients admitted with CAP, 27,970 (14.1%) underwent pUAT; 1962 (7.0%) tested positive. The strongest predictors of pUAT positivity were history of pneumococcal infection in the previous year (OR 6.99, 95% CI 4.27–11.46), severe CAP on admission (OR 1.76, 95% CI 1.56–1.98), substance abuse (OR 1.57, 95% CI 1.27–1.93), smoking (OR 1.23, 95% CI 1.09–1.39), and hyponatremia (OR 1.35, 95% CI 1.17–1.55). Negative predictors included IV antibiotic use in past year (OR 0.65, 95% CI 0.52–0.82), congestive heart failure (OR 0.72, 95% CI 0.63–0.83), obesity (OR 0.71, 95% CI 0.60–0.85), and admission from skilled nursing facility (OR 0.60, 95% CI 0.45–0.78). Model c-statistics were 0.60 and 0.67 in the internal and external validation cohorts, respectively. Compared to guideline-recommended testing of severe CAP patients, our model would have detected 23% more cases with 5% fewer tests.

Conclusion:

Readily available data can identify patients most likely to have a positive pUAT. Our model could be incorporated into automated clinical decision support to improve test efficiency and antimicrobial stewardship.

Information

Type
Original Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited
Copyright
© The Author(s), 2023. Published by Cambridge University Press on behalf of The Society for Healthcare Epidemiology of America
Figure 0

Figure 1.Schematic representation of internal and external validation employed.

Figure 1

Table 1.Baseline characteristics of patients in the derivation, internal validation, and external validation cohorts

Figure 2

Table 2.Characteristics of Premier hospital patients with positive vs. negative pneumococcal urinary antigen tests within the derivation cohort

Figure 3

Table 3.Associations between patient/hospital characteristics and pUAT positivity using multivariable logistic regression in the derivation cohort

Figure 4

Figure 2.Receiver operating characteristic (ROC) curves for derivation, internal validation, and Cleveland Clinic Health Systems (CCHS) external validation samples.

Figure 5

Figure 3.Observed vs. predicted pUAT positivity proportions in the Premier internal validation and CCHS external validation samples, based on a 14-variable prediction model derived from the Premier 80% derivation sample. (A) Premier 20% hold-out internal validation sample, (B) CCHS external validation sample. Rescaled calibration plot where a multiplicative scalar of 0.36 was applied to the original predicted probabilities.

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