Hostname: page-component-74656f9884-7drmj Total loading time: 0 Render date: 2026-11-04T14:28:24.497Z Has data issue: false hasContentIssue false

Brain imaging-wide exploration of site-specific pain: genetic correlation and Mendelian randomization study

Published online by Cambridge University Press:  28 July 2026

Weian Mao
Affiliation:
Department of Obstetrics and Gynecology, The Second Affiliated Hospital of Wenzhou Medical University , China
Peipei Ye
Affiliation:
Department of Radiology, The Second Affiliated Hospital of Wenzhou Medical University , China
Shuwei Wang
Affiliation:
Department of Anesthesia, Zhongshan Hospital, Fudan University , China
Mengchun Chen
Affiliation:
Department of Pharmacy, The Second Affiliated Hospital of Wenzhou Medical University , China
Haiying Lv
Affiliation:
Department of Radiology, Ruijin Hospital, Shanghai Jiaotong University School of Medicine, China
Shuai Yuan*
Affiliation:
Unit of Cardiovascular and Nutritional Epidemiology, Institute of Environmental Medicine, Karolinska Institutet , China
Fuhua Yan*
Affiliation:
Department of Radiology, Ruijin Hospital, Shanghai Jiaotong University School of Medicine, China
Lili Yang*
Affiliation:
Department of Radiology, Ruijin Hospital, Shanghai Jiaotong University School of Medicine, China
*
Corresponding authors: Shuai Yuan, Fuhua Yan and Lili Yang; Emails: shuai.yuan@ki.se; yfh11655@rjh.com.cn; yll12984@rjh.com.cn
Corresponding authors: Shuai Yuan, Fuhua Yan and Lili Yang; Emails: shuai.yuan@ki.se; yfh11655@rjh.com.cn; yll12984@rjh.com.cn
Corresponding authors: Shuai Yuan, Fuhua Yan and Lili Yang; Emails: shuai.yuan@ki.se; yfh11655@rjh.com.cn; yll12984@rjh.com.cn
Rights & Permissions [Opens in a new window]

Abstract

Background

Observational studies have suggested that brain imaging-derived phenotypes (IDPs) may serve as specific markers of pain-related phenotypes and severity. However, the shared genetic architecture between pain and brain IDPs and their potential causal relationships remains unclear.

Methods

We applied linkage disequilibrium score regression and Mendelian randomization (MR) analyses to uncover genetic correlations and potential causal links of brain structural (33,224 UK Biobank participants) and functional (47,276 UK Biobank participants) changes with site-specific pain phenotypes (approximately 500,000 Finngen participants). The scoping literature review was conducted to compare current findings with previous observational studies.

Results

In this study, we identified 559 significant genetic correlations between 587 structural IDPs and 13 pain-related phenotypes. Using MR analyses, we found that genetic liability to headache, migraine, joint pain, and sciatica was causally associated with alterations in 15 structural IDPs. Additionally, changes in the surface area of three brain regions were linked to a lower risk of sciatica, low back pain, and overall pain. Among the six pain-related phenotypes associated with structural IDPs, further analyses demonstrated putative causal relationships between functional IDPs and these conditions. Notably, headache exhibited both significant structural and functional changes across three key brain regions: the superior frontal gyrus, lingual gyrus, and paracentral lobule.

Conclusions

These findings provide novel insights into the genetic correlations and genetically inferred associations between pain and neurobiological abnormalities from neuroimaging perspectives, with structural alterations as the primary findings and functional changes as complementary exploratory evidence, advancing the understanding of pain-related mechanisms.

Information

Type
Original Article
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.
Copyright
© The Author(s), 2026. Published by Cambridge University Press
Figure 0

Figure 1. Illustration of the study design. Abbreviations: UKB, UK Biobank; IDP, brain imaging-derived phenotype; sMRI, structural magnetic resonance imaging; DTI, diffusion tensor imaging; LDSC, linkage disequilibrium score; IV, instrumental variable; IVW, inverse variance weighted; MR, Mendelian randomization.Figure 1. long description.

Figure 1

Figure 2. The genetic correlation between brain structure and pain.Figure 2. long description.

Figure 2

Figure 3. The bidirectional MR analysis results for the effects of pain-related phenotypes and structural IDPs with FDR-adjusted P-values < 0.05. The forest plot shows significant MR results based on the FDR-adjusted P-value estimated from either the inverse variance weighted method or the Wald ratio method from 1,107 tests conducted in both directions. The main analysis included all IVs retained from the primary IV selection procedures. In the analysis removing pleiotropic IVs, the IVs associated with possible confounders such as smoking, drinking, socioeconomic status, education, and various psychiatric disorders in the PhenoScanner database of P-value <1 × 10−5 were excluded. The bottom panel shows the anatomical regions of the brain for the corresponding IDPs bilaterally. Brain regions were overlaid on the ch2better template using Anatomical Automatic Labeling (AAL) or JHU DTI-based white-matter atlases in MRIcron software v1.0 (https://www.nitrc.org/projects/mricron/).Figure 3. long description.

Figure 3

Figure 4. The bidirectional MR analysis results for the effects of pain-related phenotypes and functional IDPs with FDR-adjusted P-values < 0.05. The forest plot shows significant MR results based on the FDR-adjusted P-value estimated from either the inverse variance weighted method or the Wald ratio method from 2,292 tests conducted in both directions. (a) Effects of pain-related phenotypes on functional IDPs. (b) Effects of functional IDPs on pain-related phenotypes.Figure 4. long description.

Figure 4

Table 1. Literature review of observational evidence relating to current MR findingsTable 1. long description.

Supplementary material: File

Mao et al. supplementary material

Mao et al. supplementary material
Download Mao et al. supplementary material(File)
File 1.1 MB