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Nitroindazolinone derivatives: assessing the impact of the nitro group location on the activity against Trypanosoma cruzi

Published online by Cambridge University Press:  03 August 2026

Cristina Fonseca-Berzal*
Affiliation:
Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad Complutense de Madrid (UCM), Madrid, Spain
Cristiane França da Silva
Affiliation:
Laboratório de Biologia Celular (LBC), Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil
Patrícia Bernardino da Silva
Affiliation:
Laboratório de Biologia Celular (LBC), Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil
Marcos Meuser Batista
Affiliation:
Laboratório de Biologia Celular (LBC), Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil
Alicia Gómez-Barrio
Affiliation:
Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad Complutense de Madrid (UCM), Madrid, Spain
Nerea Vela
Affiliation:
Instituto de Química Médica (IQM), Consejo Superior de Investigaciones Científicas (CSIC), Madrid, Spain
Vicente J. Arán
Affiliation:
Instituto de Química Médica (IQM), Consejo Superior de Investigaciones Científicas (CSIC), Madrid, Spain
Maria de Nazaré Correia Soeiro
Affiliation:
Laboratório de Biologia Celular (LBC), Instituto Oswaldo Cruz (IOC), Fundação Oswaldo Cruz (FIOCRUZ), Rio de Janeiro, Brazil
*
Corresponding author: Cristina Fonseca-Berzal; Email: crfonseca@pdi.ucm.es

Abstract

Content of image described in text.

In the last decades, different 5-nitroindazole-based compounds have been synthesized and proposed as potential agents for treating the infection caused by Trypanosoma cruzi, i.e. Chagas disease. In previous works, the 1,2-disubstituted 5-nitroindazolinone system has been identified as a promising scaffold to design compounds, among which derivatives with a benzyl moiety at N-2 stand out. Now, we have synthesized 4-, 6- and 7-nitroindazolin-3-ones (19–24), analogues of the previously studied 2-benzyl-1-methyl-5-nitroindazolinone (1) and 2-benzyl-5-nitro-1-propylindazolinone (2), to explore the impact of the nitro group position on their trypanocidal activity. These 8 nitro derivatives were in silico predicted to have good oral bioavailability and no toxicity risks. In vitro assays over bloodstream trypomastigotes (Y strain, DTU TcII) showed an improvement in the lytic profile of 2-benzyl-1-propyl derivatives, when the NO2 group is moved to position 6 of the indazole ring: EC50 = 34.55 µM (23) versus EC50 > 50 µM (2, 22 and 24). Regarding the assays on amastigotes (Tulahuen strain, DTU TcVI), 4-, 6- and 7-nitroindazoles did not display better activity (EC50 from 3.82 to > 20 µM) than 5-nitroindazoles, with EC50 = 2.34 (1) and 3.03 µM (2). The lack of cytotoxicity over cardiac (CC50 > 200 µM) and L929 cells (CC50 > 170 µM) supports selective action, particularly of 5-nitroindazolinones towards intracellular forms: SI > 85.47 (1) and 56.53 (2). Altogether, data indicate that the anti-T. cruzi activity of 4-, 6- and 7-nitroindazolinones is not better than that of 1 and 2, not presenting significant advantages over these two 5-nitroindazolinones.

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Research Article
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© The Author(s), 2026. Published by Cambridge University Press.
Figure 0

Figure 1. Chemical structures of 2-benzyl-1-methyl-5-nitroindazolin-3-one (1) and 2-benzyl-5-nitro-1-propylindazolin-3-one (2), previously identified as promising antichagasic prototypes (Montero-Torres et al. 2005; Vega et al. 2012). Numbering of indazole ring is indicated.

Figure 1

Scheme 1. Synthesis of the new 1-alkyl-2-benzyl-4-, 6- and 7-nitroindazolin-3-ones 19–24, intermediates 8–17 and byproduct 18. Reagents and conditions: (a) for 9 and 10: MeNHNH2, EtOH, reflux overnight (for 9) or for 5 h (for 10); yield 93% (9) and 82% (10). (b) K2CO3 (for 16, 17) or Cs2CO3 (for 14/18, 15), MeI (for 14/18) or PrBr (for 15–17), DMF, 100 °C (autoclave), 1 h, column chromatography; yield 73–83% (14–17), 25% (18). (c) For 8 and 11–13: 48% aq. HBr, 140 °C, 1 h; yield 84–96%. (d) BnBr, DMF, 150 °C, 6 h, column chromatography; yield 78–97%.Scheme 1 long description.

Figure 2

Table 1. Lipinski’s Rule of Five (Ro5) and Veber’s Rule (nRB and TPSA) for 1-alkyl-2-benzyl-x-nitroindazolinones 1, 2 and 19–24Table 1 long description.

Figure 3

Table 2. Toxicity risk profile, drug-likeness and drug score parameters for 1-alkyl-2-benzyl-x-nitroindazolinones 1, 2 and 19–24Table 2 long description.

Figure 4

Figure 2. Cytotoxicity profile over primary cultures of cardiac cells (CC), after 24 h of compound exposure: 2-benzyl-1-methyl-x-nitroindazolinones (A) and 2-benzyl-x-nitro-1-propylindazolinones (B). Data represent the mean value of cytotoxicity (%) at the concentrations tested ± standard error (SEM) of at least 2 independent experiments (n ≥ 2). *Significant differences (P < 0.05) with benznidazole, Mann–Whitney U test. #Significant differences (P < 0.05) with the corresponding 5-nitroindazole analogue, Mann–Whitney U test.Figure 2 long description.

Figure 5

Table 3. Trypanocidal activity of 1-alkyl-2-benzyl-x-nitroindazolinones 1, 2 and 19–24 against bloodstream trypomastigotes (BT) of T. cruzi Y strain (DTU TcII), expressed as EC90 (µM) and EC50 (µM), and cytotoxicity on primary cultures of cardiac cells (CC), expressed as CC50 (µM)Table 3 long description.

Figure 6

Figure 3. Cytotoxicity profile over primary cultures of cardiac cells (CC), after 48 h of compound exposure: 2-benzyl-1-methyl-x-nitroindazolinones (A) and 2-benzyl-x-nitro-1-propylindazolinones (B). Data represent the mean value of cytotoxicity (%) at the concentrations tested ± standard error (SEM) of at least 2 independent experiments (n ≥ 2). *Significant differences (P < 0.05) with benznidazole, Mann–Whitney U test. #Significant differences (P < 0.05) with the corresponding 5-nitroindazole analogue, Mann–Whitney U test.Figure 3 long description.

Figure 7

Figure 4. Cytotoxicity profile over cultures of L929 cells after 96 h of compound exposure: 2-benzyl-1-methyl-x-nitroindazolinones (A) and 2-benzyl-x-nitro-1-propylindazolinones (B). Data represent the mean value of cytotoxicity (%) at the concentrations tested ± standard error (SEM) of at least 2 independent experiments (n ≥ 2). *Significant differences (P < 0.05) with benznidazole, Mann–Whitney U test. #Significant differences (P < 0.05) with the corresponding 5-nitroindazole analogue, Mann–Whitney U test.Figure 4 long description.

Figure 8

Table 4. Trypanocidal activity of 1-alkyl-2-benzyl-x-nitroindazolinones 1, 2 and 19–24 against intracellular amastigotes of T. cruzi Tulahuen strain (DTU TcVI), expressed as EC90 (µM) and EC50 (µM), and cytotoxicity on cultures of L929 cells (CC), expressed as CC50 (µM)Table 4 long description.

Figure 9

Figure 5. Trypanocidal activity against bloodstream trypomastigotes (BT) of T. cruzi Y strain (DTU TcII) after 24 h of compound exposure: 2-benzyl-1-methyl-x-nitroindazolinones (A) and 2-benzyl-x-nitro-1-propylindazolinones (B). Data represent the mean value of activity (%) at the concentrations tested ± standard error (SEM) of at least 2 independent experiments (n ≥ 2). *Significant differences (P < 0.05) with benznidazole, Mann–Whitney U test. #Significant differences (P < 0.05) with the corresponding 5-nitroindazole analogue, Mann–Whitney U test.Figure 5 long description.

Figure 10

Figure 6. Trypanocidal activity against intracellular amastigotes of T. cruzi Tulahuen strain (DTU TcVI) after 96 h of compound exposure: 2-benzyl-1-methyl-x-nitroindazolinones (A) and 2-benzyl-x-nitro-1-propylindazolinones (B). Data represent the mean value of activity (%) at the concentrations tested ± standard error (SEM) of at least 2 independent experiments (n ≥ 2). *Significant differences (P < 0.05) with benznidazole, Mann–Whitney U test. #Significant differences (P < 0.05) with the corresponding 5-nitroindazole analogue, Mann–Whitney U test.Figure 6 long description.

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