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Multiple high-risk HPV genotypes are grouped by type and are associated with viral load and risk factors

Published online by Cambridge University Press:  10 February 2017

L. DEL RÍO-OSPINA
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia School of Medicine, Universidad Nacional de Colombia, Bogotá D.C., Colombia
S. C. SOTO-DE LEÓN
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia Universidad de Ciencias Aplicadas y Ambientales (UDCA), Bogotá D.C., Colombia
M. CAMARGO
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia PhD Programme in Biomedical and Biological Sciences, Universidad del Rosario, Bogotá D.C., Colombia
R. SÁNCHEZ
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia School of Medicine, Universidad Nacional de Colombia, Bogotá D.C., Colombia
D. A. MORENO-PÉREZ
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia PhD Programme in Biomedical and Biological Sciences, Universidad del Rosario, Bogotá D.C., Colombia
A. PÉREZ-PRADOS
Affiliation:
Mathematics Department, Universidad Pública de Navarra, Pamplona, Spain
M. E. PATARROYO
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia School of Medicine, Universidad Nacional de Colombia, Bogotá D.C., Colombia
M. A. PATARROYO*
Affiliation:
Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá D.C., Colombia School of Medicine and Health Sciences, Universidad del Rosario, Bogotá D.C., Colombia
*
*Author for correspondence: M. A. Patarroyo, Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Cra 50 # 26-20, Bogotá, Colombia. (Email: mapatarr.fidic@gmail.com)
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Summary

Investigating whether high-risk human papillomavirus (HR-HPV) types tend to become grouped in a particular way and whether factors are associated with such grouping is important for measuring the real impact of vaccination. In total, 219 women proving positive for HPV as detected by real-time PCR were included in the study. Each sample was analysed for detecting and quantifying six viral types and the hydroxymethylbilane synthase gene. Multiple correspondence analysis led to determining grouping patterns for six HR-HPV types and simultaneous association with multiple variables and whether viral load was related to the coexistence of other viral types. Two grouping profiles were identified: the first included HPV-16 and HPV-45 and the second profile was represented by HPV-31, HPV-33 and HPV-58. Variables such as origin, contraceptive method, births and pregnancies, educational level, healthcare affiliation regime, atypical squamous cells of undetermined significance and viral load were associated with these grouping profiles. Different socio-demographic characteristics were found when coinfection occurred by phylogenetically related HPV types and when coinfection was due to non-related types. Biological characteristics, the number of viral copies, temporality regarding acquiring infection and competition between viral types could influence the configuration of grouping patterns. Characteristics related to women and HPV, influence such interactions between coexisting HPV types reflecting the importance of their evaluation.

Information

Type
Original Papers
Copyright
Copyright © Cambridge University Press 2017 
Figure 0

Table 1. Socio-demographic characteristics, risk factors and cervical findings for the population being studied

Figure 1

Table 2. HPV genotype and absolute viral load distribution in single and multiple infections

Figure 2

Table 3. Active variables’ contributions, cosine squared, test values, and the corresponding type's viral load correlation coefficient

Figure 3

Fig. 1. Multiple correspondence analysis (MCA). The figure shows the association of the variables distributed in the four quadrants. Active variables are represented by filled-in squares, the illustrative nominal variables are shown by empty squares and arrows represent illustrative continuous variables. The size of the squares is proportional to each modality's contribution to the most representative factor. The arrow's length shows the correlation of viral load with each factor. The numbers on the axes represent test values, indicating the significance of representation of each modality's variable regarding each factor.

Figure 4

Table 4. Test values for illustrative nominal variables