Hostname: page-component-74656f9884-8r8nv Total loading time: 0 Render date: 2026-11-08T08:02:30.394Z Has data issue: false hasContentIssue false

A multiplex PCR for the identification of Echinococcus multilocularis, E. granulosus sensu stricto and E. canadensis that infect human

Published online by Cambridge University Press:  31 July 2019

Fan Chen*
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Lei Liu
Affiliation:
Sichuan Provincial Orthopedic Hospital, Sichuan, China
Qili He
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Yan Huang
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Wentao Wang
Affiliation:
West China Hospital, Sichuan, China
Guo Zhou
Affiliation:
Sichuan Provincial People's Hospital, Sichuan, China
Wenjie Yu
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Wei He
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Qi Wang
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Guangjia Zhang
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Sha Liao
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Ruirui Li
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Liu Yang
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Renxin Yao
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Qian Wang*
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
Bo Zhong*
Affiliation:
Sichuan Center for Disease Control and Prevention, Sichuan, China
*
Author for correspondence: Fan Chen, E-mail: 1149837551@qq.com; Qian Wang, E-mail: 2781958232@qq.com and Bo Zhong, E-mail: 402417235@qq.com
Author for correspondence: Fan Chen, E-mail: 1149837551@qq.com; Qian Wang, E-mail: 2781958232@qq.com and Bo Zhong, E-mail: 402417235@qq.com
Author for correspondence: Fan Chen, E-mail: 1149837551@qq.com; Qian Wang, E-mail: 2781958232@qq.com and Bo Zhong, E-mail: 402417235@qq.com

Abstract

Echinococcus granulosus sensu stricto (s.s.), Echinococcus multilocularis and Echinococcus canadensis are the common causes of human echinococcosis in China. An accurate species identification tool for human echinococcosis is needed as the treatments and prognosis are different among species. The present work demonstrates a method for the simultaneous detection of these three Echinococcus species based on multiplex polymerase chain reaction (mPCR). Specific primers of this mPCR were designed based on the mitochondrial genes and determined by extensive tests. The method can successfully detect either separated or mixed target species, and generate expected amplicons of distinct size for each species. Sensitivity of the method was tested by serially diluted DNA, showing a detection threshold as less as 0.32 pg for both E. granulosus s.s. and E. canadensis, and 1.6 pg for E. multilocularis. Specificity assessed against 18 other parasites was found to be 100% except weakly cross-react with E. shiquicus. The assay was additionally applied to 69 echinococcosis patients and 38 healthy persons, confirming the high reliability of the method. Thus, the mPCR described here has high application potential for clinical identification purposes, and can further provide a useful tool for evaluation of serology and imaging method.

Information

Type
Research Article
Copyright
Copyright © Cambridge University Press 2019 
Figure 0

Table 1. Information on parasite samples used in the study

Figure 1

Table 2. Characteristics of primers used in mPCR

Figure 2

Fig. 1. PCR products of single and pooled DNA of E. granulosus s.s., E. multilocularis and E. canadensis in mPCR assay. Lanes 1–3, amplicons of E. granulosus s.s., E. multilocularis and E. canadensis, respectively; lane 4, amplicons of mixed DNA of E. granulosus s.s. and E. multilocularis; lane 5, amplicons of mixed DNA of E. granulosus s.s. and E. canadensis; lane 6, amplicons of mixed DNA of E. canadensis and E. multilocularis; lane 7, amplicons of mixed DNA of E. granulosus s.s., E. multilocularis and E. canadensis, N, negative control; M, DNA marker.

Figure 3

Fig. 2. Specificity of the mPCR. Lanes 1–3, positive controls (amplicons of E. granulosus s.s., E. multilocularis and E. canadensis, respectively); lanes 4–20, amplicons of other parasite DNA samples: E. shiquicus (lanes 4–8), T. asiatica (lane 9), T. saginata (lanes 10 and 11), T. solium (lanes 12 and 13), T. hydatigena (lane 14), T. taeniaeformis (lanes 15–18), T. serialis (lane 19), T. multiceps (lane 20) and T. leonina (lane 21); M, DNA marker (100–600 bp); N, negative control.

Figure 4

Fig. 3. Sensitivity of the mPCR for three targeted species, respectively. The DNA detection limit using a serial dilution of standard DNA of (A) E. granulosus s.s., (B) E. multilocularis and (C) E. canadensis, respectively. Lanes 1–8, 5-fold serially diluted DNA templates (1000, 200, 40, 8, 1.6, 0.32, 0.064, 0.0128 pg); M, DNA marker; N, negative control.

Figure 5

Fig. 4. Validation results of mPCR. Reliability was assessed by tested with human-derived parasite DNA that has been sequenced (A) and healthy human DNA (B). (A) Lanes 1–26, parasite DNA from humans, including one E. canadensis (lane 10), eight E. multilocularis (lanes 4, 8, 11, 14, 17, 22, 23 and 26) and the rest were E. granulosus s.s. (B) Lanes 27–51, healthy human DNA; M, DNA marker; P, positive control (DNA mixture of E. granulosus s.s., E. multilocularis and E. canadensis); N, negative control.