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PCR-based molecular discrimination between Maritrema eroliae and Probolocoryphe uca (Digenea: Microphallidae) in Kuwait Bay

Published online by Cambridge University Press:  07 January 2013

W.Y. Al-Kandari*
Affiliation:
Department of Biological Sciences, Faculty of Science, Kuwait University
S.A. Al-Bustan
Affiliation:
Department of Biological Sciences, Faculty of Science, Kuwait University
M. Alnaqeeb
Affiliation:
Department of Biological Sciences, Faculty of Science, Kuwait University
A.M. Isaac
Affiliation:
Department of Biological Sciences, Faculty of Science, Kuwait University
*
*Fax: (+965) 24847054 E-mail: wafa.alkandari@ku.edu.kw
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Abstract

Microphallid trematodes are common parasites in marine snails and crustacean hosts at Kuwait Bay. The larval stages of two microphallids, Maritrema eroliae and Probolocoryphe uca, are difficult to differentiate morphologically. In this study, two PCR-based techniques were established for quick and accurate discrimination between the larval stages of the two microphallid species, employing restriction fragment length polymorphism (PCR-RFLP) and species-specific primers. Both techniques utilized nucleotide differences in the second internal transcribed region (ITS2) of the ribosomal DNA (rDNA) in the two species. For the PCR-RFLP technique, restriction enzyme AvaII was selected and it generated different restriction profiles among the two microphallids. In addition, species-specific primers were prepared for each microphallid species that amplified distinctive fragments. Both techniques showed that the larval stages of the two microphallid species can be identified accurately. However, direct PCR amplification using species-specific primers was more advantageous than the PCR-RFLP technique since it allowed rapid and specific discrimination between the two species. This technique provides a useful tool that can be used in future studies for the study of the distribution of microphallid species and their definitive hosts at different localities of Kuwait Bay.

Information

Type
Research Papers
Copyright
Copyright © Cambridge University Press 2013 
Figure 0

Fig. 1Sequences of the ITS2 rDNA region of the microphallid species. (a) Maritrema eroliae, where the box represents the recognition site of the AvaII restriction enzyme. The primer annealing sites of (MeR1/MeR2) are underlined. (b) Probolocoryphe uca, where the primer annealing sites of (PuR1/PuR2) are underlined.

Figure 1

Fig. 2RFLP patterns of ITS2 PCR products of Maritrema eroliae and Probolocoryphe uca from Kuwait Bay after digestion with AvaII enzyme and visualized on a 3:1 Nusieve-agarose gel stained with 10 μg/ml ethidium bromide. Lanes: M, 50 bp DNA marker; 1, PCR products of P. uca; 2 and 3, PCR products of P. uca after digestion with AvaII; 4, AvaII enzyme reaction with no DNA; 5, PCR products of M. eroliae; 6 and 7, PCR products of M. eroliae after digestion with AvaII.

Figure 2

Fig. 3PCR amplification of genomic DNA of Maritrema eroliae and Probolocoryphe uca from Kuwait Bay using species-specific ITS2 primers and visualized on a 1.2% agarose gel stained with 10 μg/ml ethidium bromide. Lanes: M, 50 bp DNA marker; 1, PCR products of P. uca with trematode-specific primers; 2, PCR products of M.eroliae with MeR1–MeR2 primers; 3, PCR products of P. uca with MeR1–MeR2 primers; 4, reaction with no DNA; 5, PCR products of M. eroliae with trematode-specific primers; 6, PCR products of P. uca with PuR1–PuR2 primers; 7, PCR products of M.eroliae with PuR1–PuR2 primers.