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Genetically encoded “smart” peptide polymers for biomedicine

Published online by Cambridge University Press:  10 January 2014

Eric Mastria
Affiliation:
Duke University, Durham, NC; eric.mastria@duke.edu
Ashutosh Chilkoti
Affiliation:
Department of Biomedical Engineering, Duke University, Durham, NC; chilkoti@duke.edu

Abstract

Drug delivery systems are becoming increasingly sophisticated, with the ability to target and penetrate specific tissues and release drugs based upon the local environment. While these advanced systems often offer advantages over their less sophisticated counterparts, the final product may be more complex and require additional manufacturing steps. In this article, we review a body of work based on genetically encoded elastin-like polypeptides (ELPs) that offer a route to modular, multifunctional delivery systems that are simple to manufacture. ELPs are temperature-sensitive biopolymers that can be designed on the genetic level and expressed in cell-based protein production systems. The tools of molecular biology and versatility of proteins are used to engineer polymers with precise composition and molecular weight that self-assemble to form drug delivery systems with an impressive variety of features and functions. Due to their versatility and ease of production, ELPs are likely to contribute to the goal of designing simple and effective “smart” delivery systems.

Information

Type
Research Article
Copyright
Copyright © Materials Research Society 2014 
Figure 0

Figure 1. Purification and biodegradability of elastin-like polypeptides (ELPs). (a) Purification of an ELP-thioredoxin fusion protein by inverse transition cycling. The purification is followed by running samples from each step on a SDS-PAGE (sodium dodecyl sulfate polyacrylamide gel electrophoresis) gel. Lane 1: Soluble E. coli lysate. The ELP-fusion protein is visible at approximately 55 kilodaltons (kDa), marked by an arrow. Lane 2: Supernatant from first hot spin, demonstrating that most non-ELP proteins remained soluble. Lane 3: Resolubilized hot spin 1 pellet, where the ELP-thioredoxin fusion is the band near 55 kDa. Lane 4: Hot spin 2 supernatant, which is largely free of contaminating protein. Lane 5: Hot spin 2 with highly pure ELP-thioredoxin protein, with no detectable bands from contaminating proteins. This is the final product of the purification process. Lane 6: Molecular weight (MW) ladder, with bands labeled in kDa. (b) In vitro biodegradability of ELP. Breakdown of 14C-labeled ELP after incubation in fresh mouse serum at 37°C. The MW is indicated by the MW marker in the left lane shown in kDa. An arrow demarcating the approximate renal filtration cutoff (RFC) is included for reference. The incubation time is indicated above each sample. The distended appearance of the ELP band (top band) is due to the presence of serum albumin in plasma at a similar MW (∼67 kDa). (c) After tail vein injection of mice bearing FaDu tumors (a cell line derived from human squamous cell carcinoma of the pharynx), percent degradation was calculated as measured by TCA (trichloroacetic acid) precipitation. Reproduced with permission from Reference 24, © 2006 Elsevier and Reference 32, © 1999 Nature Publishing Group.

Figure 1

Figure 2. Elastin-like polypeptide (ELP) transition temperatures can be predicted by an analytical model. (a) Three-dimensional surface plot of Tt (cloud point temperature) versus falanine (fraction of alanines in guest residue positions) versus pentamer repeats at 25 µm in phosphate buffered saline. The cloud point temperature tends to increase with an increase in falanine and a decrease in the number of pentamer repeats. (b) Demonstration of model fit (dotted line) by plotting observed versus predicted Tt. Unfilled data points were used in developing the model and led to a coefficient of determination (R2) value of 0.993. Colored points are ELPs made subsequent to the development of the model and fall very close to the model’s prediction (R2 = 0.999, slope = 0.95). The red circles (A[0.2]-20) contain 20% alanine in the guest residue position, with 20 pentamer repeats. The orange squares (A[0.5]-120) contain 50% alanine in the guest residue position with 120 pentamer repeats. The blue triangles (A[0.8]-240) contain 80% alanine in the residue position, with 240 pentamer repeats. Adapted with permission from Reference 23.

Figure 2

Figure 3. Elastin-like polypeptides (ELPs) self-assemble into micelles upon conjugation of hydrophobic molecules. (a) Schematic showing range of molecules tested and the cutoff for micelle formation. The compounds all share a functional group for conjugation to cysteine as a maleimide bond, shown outside the circle. The compounds begin at the top of the circle with relatively hydrophilic molecules that steadily increase in hydrophobicity as measured by the Log of the octanol-water distribution coefficient (Log(D)). The attachment of compounds with Log(D) < 1.5 (shown in blue) did not trigger self-assembly of the chimeric polypeptide (CP), whereas compounds with Log(D) > 1.5 (shown in pink) triggered self-assembly of the CP into nanoparticles. (b) Cryo-TEM (cryogenic transmission electron microscopy) images of CP conjugates, confirming cutoff of 1.5 for Log(D). Scale bars: 100 nm. (c) Freeze-fracture TEM of chimeric polypeptide-doxorubicin (CP-Dox) micelles, showing nanoparticles with a size of ∼50 nm. Inset at top right of panel shows a schematic of star-like micelle, with hydrophobic doxorubicin (red) in the core and hydrophilic ELP (yellow) in the corona. Adapted from with permission from References 17 and 38.

Figure 3

Figure 4. Conjugation of doxorubicin to elastin-like polypeptide (ELP) improves its efficacy in comparison to free doxorubicin. (a) Pharmacokinetics of chimeric polypeptide-doxorubicin (CP-Dox) and free doxorubicin demonstrating higher plasma levels and longer half-life of CP-Dox than free drug. The data closely follow the two-compartment model fit applied to the CP-Dox data (Fit), and to the predicted pharmacokinetic model of free Dox in mice (Predicted). (b) Significantly lower accumulation of doxorubicin in the heart for CP-Dox treated mice. (c) Significantly higher accumulation of doxorubicin in a subcutaneous C26 tumor for CP-Dox mice (for b and c, * indicates p < 0.0005, where p is the result from any statistical test, which represents the probability that the results observed were due to random chance) (analysis of variance, Tukey’s Post-hoc test). (d) Significantly improved survival of CP-Dox treated mice for subcutaneous C26 tumor bearing mice (** indicates p = 0.0001, 0.00004 for CP-Dox versus Dox and phosphate buffered saline (PBS, vehicle control), respectively (Kaplan–Meier)). (e) Mice were inoculated orthotopically with 4T1 murine mammary tumor on Day 0. Mice treated with neoadjuvant and adjuvant CP-Dox treatment (Drug Tx-drug treatment, black arrows) along with surgery (gray arrow) had significantly prolonged metastasis-free survival compared to free Dox mice (** indicates p < 0.01, Log-Rank test). Adapted from Reference 17.

Figure 4

Figure 5. Doxorubicin nanoparticles that transition upon application of mild hyperthermia. (a) Chimeric polypeptide-doxorubicin (CP-Dox) nanoparticle is designed to transition sharply between 39°C and 42°C (the range relevant for clinical hyperthermia, shaded in gray), leading to an increase in the optical density (OD) as the temperature of the solution increases. Cytotoxicity of the drug conjugate is consistent whether cells were kept at (b) 37°C or (c) 42°C, as measured by viability (fraction viable compared to untreated control). (d) The formation of micelles keeps the local concentration of elastin-like polypeptide (ELP) relatively constant even for bulk changes in concentration, leading to near-independence of the Tt on bulk concentration. As shown by the horizontal lines on the graph, the transition temperature of the CP-Dox nanoparticle (red) remains in the relevant temperature range of 37–42°C over a concentration range spanning three orders of magnitude. In contrast, the same ELP without doxorubicin attached (CP4, blue) and another ELP (ELP5, green) in unimer form, show strong dependence of Tt (cloud point temperature) on concentration. Adapted from Reference 41.

Figure 5

Figure 6. Targeting tumor endothelial cells with NGR (Asparagine-Glycine-Arginine) presenting elastin-like polypeptide (ELP) micelles. (a) ELP block copolymers assemble to form ∼50–60 nm diameter spherical micelles at body temperature without NGR peptide (top) and with NGR peptide (bottom), as measured by dynamic light scattering. (b) Confocal microscopy of tumor tissue after tail vein injection of fluorophore-labeled micelle-forming ELP diblock copolymers. The NGR presenting micelles (NGR-ELP-64/90, bottom) are seen at a much higher density compared to the ELP control without ligand (top). The ELP (green) co-localizes with the CD31 antibody, which stains endothelial cells (red). Adapted from Reference 42.

Figure 6

Figure 7. Intracellular targeting with temperature triggered elastin-like polypeptide (ELP) micelles. (a) Dynamic light scattering data showing a sharp transition from unimer to micelle (critical micellization temperature [CMT] between 33°C and 34°C) for ELPs with and without the RGD (Arg-Gly-Asp) ligand. (b) Cell uptake, indicated by increased intracellular green signal, is triggered by incubation above the CMT with micelles that are decorated with RGD ligand (top right). Uptake is poor for temperatures below the CMT (left) and for ELP without RGD ligand (bottom). (c) Schematic demonstrating the high ligand density triggered by micelle formation when the temperature is increased above the CMT. (d) ELP signal (green) is observed intracellularly for Arg5 (ELP containing 5 arginines on the end of the polymer), micelle forming ELP above the CMT (iv and inset), but there is negligible signal for all samples below CMT (37°C, (i)–(iii) top), ELP without Arg5 ((ii) and (v) middle), and ELP that does not form micelles ((iii) and (vi) right). Scale bars are 25 μm. Adapted from References 45 and 27. Note: T-temperature; BC, block copolymer; Arg, arginine; Gly, glycine; Asp, aspartate.

Figure 7

Figure 8. (a) Phase diagram of the triple-responsive (temperature, pH, and transition metal) micelles. Note that data in the absence of ZnCl2 are plotted at 1 μM ZnCl2 to enable presentation on a log scale. The different colored regions of the 3D plot represent the ranges of stimulus combinations (temperature, pH, and Zn2+ concentration) at which the histidine-rich diblock elastin-like polypeptide (ELP) exists as a unimer (blue), micelle (red), or aggregate (black). (b) pH triggered ELP self-assembly and disassembly. The left vertical axis shows the hydrodynamic radius (Rh), as measured by dynamic light scattering, while the right vertical axis shows the solution pH. The ELP repeatedly responds to cycles in pH by assembling into micelles (Rh of about 30 nm) at higher pH, and disassembling into unimers (Rh of 7–8 nm) at lower pH. (c) Triple responsive diblock ELPs self-assemble into spherical micelles as visualized by tapping mode atomic force microscopy in buffer.