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Integrative taxonomy and phylogenetic relationships between representatives of genera within Merliniinae (Nematoda: Merliniidae), with new data on fourteen known and one unknown species

Published online by Cambridge University Press:  30 November 2023

M. Hosseinvand*
Affiliation:
Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
A. Eskandari*
Affiliation:
Department of Plant Protection, Faculty of Agriculture, University of Zanjan, 45371-38791, Zanjan, Iran
K. Azizi
Affiliation:
Department of Plant Protection, Lorestan University, 68151-44316, Khoramabad, Iran
J.E. Palomares-Rius
Affiliation:
Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004 Córdoba, Campus de Excelencia Internacional Agroalimentario, ceiA3, Spain
P. Castillo
Affiliation:
Instituto de Agricultura Sostenible (IAS), Consejo Superior de Investigaciones Científicas (CSIC), Avenida Menéndez Pidal s/n, 14004 Córdoba, Campus de Excelencia Internacional Agroalimentario, ceiA3, Spain
J. Abolafia
Affiliation:
Departamento de Biología Animal, Biología Vegetal y Ecología, Universidad de Jaén, Campus ‘Las Lagunillas’ s/n, Edificio B3, 23071 Jaén, Spain
R. Ghaderi
Affiliation:
Department of Plant Protection, School of Agriculture, Shiraz University, 71441-65186, Shiraz, Iran
J. Helder
Affiliation:
Laboratory of Nematology, Department of Plant Sciences, Wageningen University, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands
X. Qing
Affiliation:
Department of Plant Protection, Nanjing Agricultural University, Nanjing, China
*
Corresponding authors: M. Hosseinvand and A. Eskandari; Emails: M.houseinvand@gmail.com; eskandari.a@znu.ac.ir
Corresponding authors: M. Hosseinvand and A. Eskandari; Emails: M.houseinvand@gmail.com; eskandari.a@znu.ac.ir
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Abstract

The application of integrative taxonomic approaches is useful to species delineation based on a combination of distinct types of characters, here morphological features and ribosomal DNA sequences. In this study, we surveyed ectoparasitic nematodes of the subfamily Merliniinae in cultivated and natural environments in Iran. Results of morphological and morphometrical studies, light and scanning electron microscopic observations, and molecular analyses allowed us the identification of fourteen known and one unknown species including representatives of the genera Amplimerlinius (five species), Geocenamus (one species), Merlinius (three species), Nagelus (two species), Paramerlinius (one species), Scutylenchus (two species), and Telomerlinius (one species). The unknown species, Scutylenchus sp., characterized by having 35–50 incisures at mid-body; lateral field with 6 longitudinal incisures; lip region slightly offset by a constriction, flattened at front end; bearing 5–7 annuli; cephalic framework not refractive; stylet robust, 18.3–27 μm long; post anal intestinal sac absent; tail elongate conical, dorsally convex, with 24 (19–28) annuli in ventral side, ending to a smooth terminus and males common; spicules 24.5–31 μm long. The phylogenetic analyses were carried out using molecular data from nuclear ribosomal DNA (rDNA) genes viz. D2–D3 expansion segments of the large ribosomal subunit (28S rRNA), partial small ribosomal subunit (18S rRNA), and internal transcribed spacer (ITS). The molecular variability of D2–D3 expansion segments of the 28S rRNA and partial 18S rRNA was low in this family in comparison to the ITS region, which could be a more helpful molecular marker in species and genus identification.

Information

Type
Research Paper
Copyright
© university of Zanjan, 2023. Published by Cambridge University Press
Figure 0

Table 1.Classification of Merliniinae genera based on Siddiqi (2000), Geraert (2011), and Sturhan (2012)

Figure 1

Table 2.List of species, localities, and GenBank accession numbers of specimens obtained in this study for phylogenetic analysis based on 28S rRNA, 18S rRNA, and ITS genes

Figure 2

Figure 1.Line drawings of the Iranian population of Geocenamus tenuidens. A, C–E, female and B, F, male. A, B, entire body. C, anterior region. D, pharyngeal region. E, F, tail region. G, vulval region.

Figure 3

Figure 2.Light micrographs of the Iranian population of Geocenamus tenuidens. A–E, female and F, male. A–C, anterior region. D–F, tail region. Scale bars = 10 μm.

Figure 4

Figure 3.SEM micrographs of the Iranian population of Geocenamus tenuidens. A–J, female and K, L, male. A, E, F, anterior region (white arrows indicating the amphidial apertures). B, C, en face view of cephalic region. D, excretory pore in ventral view (white arrow indicating the excretory pore). G, lateral field. H, vulval region in ventral view showing small lateral flaps. I–L, tail region (white and black arrows indicating the phasmid).

Figure 5

Table 3.Morphometrics of Geocenamus tenuidens from Iran. All measurements are in μm and in the form: mean ± s.d. (range)

Figure 6

Figure 4.Line drawings of the Iranian population of Merlinius alboranensis. A, C, D, F–H, J, female and B, E, I, male. A, B, entire body. C, pharyngeal region. D, basal bulb of pharynx. E, F, anterior region. G, reproductive system. H–J, tail region.

Figure 7

Figure 5.Light micrographs of the Iranian population of Merlinius alboranensis. A, B (right), C–H, female and B (left), male. A, pharyngeal region. B, entire body. C, D, anterior region. E, lateral field and deirid. F–H, tail region. Scale bars: A, C–H = 10 μm; B= 100 μm.

Figure 8

Figure 6.SEM micrographs of the Iranian population of Merlinius alboranensis. A–L, female and M, N, male. A, anterior region (black arrow indicating the excretory pore). B, C, lateral view of cephalic region (black arrows indicating the amphidial apertures). D, en face view of cephalic region. E, excretory pore in ventral view (white arrow indicating the excretory pore). F, lateral field at deirid region. G, lateral field at mid-body. H, Lateral field at vulval region. I, vulval region in ventral view. J, anus in ventral view. K–N, tail region (white arrows indicating the phasmid).

Figure 9

Table 4.Morphometrics of Merlinius alboranensis from Iran. All measurements are in μm and in the form: mean ± s.d. (range)

Figure 10

Table 5.Morphometrics of Nagelus leptus from Iran. All measurements are in μm and in the form: mean ± s.d. (range)

Figure 11

Figure 7.Light micrographs of the Iranian population of Nagelus leptus. A–D, female. A, B, anterior region. C, D, tail region. Scale bars = 10 μm.

Figure 12

Figure 8.Line drawings of the Iranian (Sendan) population of Scutylenchus sp. A, C, D, F–H, J–M, female and B, E, I, male. A, B, entire body. C, anterior region. D, E, pharyngeal region. F, reproductive system; G–L, tail region. M, cross section at mid-body.

Figure 13

Figure 9.Light micrographs of the Iranian (Sendan) population of Scutylenchus sp. A–J, female. A–C, H, anterior region. D–G, tail region. I, J, cross section at mid-body. Scale bars = 10 μm.

Figure 14

Figure 10.Light micrographs of the Iranian (Sendan) population of Scutylenchus sp. A–C, male. A–C, tail region. Scale bars = 10 μm.

Figure 15

Figure 11.SEM micrographs of the Iranian population of Scutylenchus sp. A–M, female and N, O, male. A, anterior region. B, C, lateral view of cephalic region (white arrows indicating the amphidial apertures). D, en face view of cephalic region (white arrows indicating the amphidial apertures). E, excretory pore in ventral view (white arrow indicating the excretory pore). F, lateral field at pharyngeal region. G, lateral field at mid-body. H, I, vulval region. J, anus. K–O, tail region (white arrows indicating the anus and black arrows indicating the phasmid).

Figure 16

Figure 12.Line drawings of the Iranian population of Telomerlinius teleosus. A, C, E, G, I–M, O, female and B, D, F, H, N, male. A, B, entire body. C, pharyngeal region. D, E, anterior region. F, spicules and gubernaculum. G, reproductive system. H–J, basal bulb of pharynx. K–N, tail region. O, vulval region.

Figure 17

Figure 13.Light micrographs of the Iranian population of Telomerlinius teleosus. B, C, E, F–J, female and A, D, K, male. A, B, entire body. C, pharyngeal region. D, E, anterior region. F, basal bulb of pharynx. G, vulval region. H, I, K, tail region. J, lateral field at mid-body. Scale bars: A–B = 100 μm; C–K = 10 μm.

Figure 18

Figure 14.SEM micrographs of the Iranian population of Telomerlinius teleosus. A–L, female and M–O, male. A, anterior region (black arrow indicating the excretory pore). B–D, lateral view of cephalic region. E, F, en face view of cephalic region. G, lateral field at mid-body. H, excretory pore in ventral view (black arrow indicating the excretory pore). I, vulval region. J, anus (black arrow indicating the anus). K–N, tail region (black arrows indicating the phasmid). O, cloacal region.

Figure 19

Table 6.Morphometrics of Scutylenchus sp. from Iran. All measurements are in μm and in the form: mean ± s.d. (range)

Figure 20

Table 7.Morphometrics of Damavand mountain population of Scutylenchus sp. from Iran. All measurements are in μm and in the form: mean ± s.d. (range)

Figure 21

Table 8.Morphometrics of Telomerlinius teleosus from Iran. All measurements are in μm and in the form: mean ± s.d. (range)

Figure 22

Figure 15.3D modelling of the genera in Merliniinae. Type 1: Cephalic radial grooves absent; the lip region is not divided into sectors, and all lips are completely fused and merged with perioral disc, lip region continuous from body. Type 2: Lip region with two separated lateral lips, reduced in size; two sectors of each subdorsal and subventral lips are fused. Perioral disc not distinct and merged with the first annulus of lip region, lip region with slightly offset from body. Type 3: Lip region distinctly separated into six sectors by radial grooves; lateral lips are slightly reduced in size. Perioral disc distinct and separated but not elevated from the lip region, lip region offset from body. Type 4: Similar to Type 3, but perioral disc is distinctly elevated from the lip region, lip region distinctly offset from body.

Figure 23

Figure 16.Phylogenetic relationships among Merliniidae species. Bayesian 50% majority rule consensus tree as inferred from D2–D3 expansion segments of 28S rRNA sequence alignment under a transitional model of invariable sites and a gamma-shaped distribution (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. (Scale bar = expected changes per site).

Figure 24

Figure 17.Phylogenetic relationships among Merliniidae species. Bayesian 50% majority rule consensus tree as inferred from partial 18S rRNA gene sequence alignment under a transitional model of invariable sites and a gamma-shaped distribution (TIM3 + I + G). Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. (Scale bar = expected changes per site).

Figure 25

Figure 18.Phylogenetic relationships among Merliniidae species. Bayesian 50% majority rule consensus tree as inferred from ITS rRNA sequence alignment under transitional and a gamma-shaped distribution (TIM2 + G) model. Posterior probabilities greater than 0.70 are given for appropriate clades. Newly obtained sequences in this study are shown in bold. (Scale bar = expected changes per site).