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Transmission of severe acute respiratory coronavirus virus 2 (SARS-CoV-2), delta variant, between two fully vaccinated healthcare personnel

Published online by Cambridge University Press:  08 November 2021

L. Leigh Smith*
Affiliation:
Division of Infectious Diseases, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland
Aaron M. Milstone
Affiliation:
Division of Infectious Diseases, Department of Pediatrics, Johns Hopkins University School of Medicine, Baltimore, Maryland
Morgan Jibowu
Affiliation:
Department of Healthcare Epidemiology and Infection Control, Johns Hopkins Health System, Baltimore, Maryland
Chun Huai Luo
Affiliation:
Division of Medical Microbiology, Department of Pathology, Johns Hopkins Hospital, Baltimore, Maryland
C. Paul Morris
Affiliation:
Division of Medical Microbiology, Department of Pathology, Johns Hopkins Hospital, Baltimore, Maryland National Institute of Allergy and Infectious Disease, National Institutes of Health, Bethesda, Maryland
Heba H. Mostafa
Affiliation:
Division of Medical Microbiology, Department of Pathology, Johns Hopkins Hospital, Baltimore, Maryland
Lisa L. Maragakis
Affiliation:
Division of Infectious Diseases, Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland
*
Author for correspondence: L. Leigh Smith, E-mail: lsmit213@jh.edu
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Abstract

Information

Type
Letter to the Editor
Copyright
© The Author(s), 2021. Published by Cambridge University Press on behalf of The Society for Healthcare Epidemiology of America
Figure 0

Fig. 1. Analysis of SARS-CoV-2 delta variant genomes from 2 fully vaccinated healthcare workers (HCWs) compared with other viral isolates from April through July 2021. (A) Relationship between the 2 HCW SARS-CoV-2 genomes to 41 other SARS-CoV-2 delta variants identified at Johns Hopkins Molecular Virology diagnostic laboratory and characterized by whole-genome sequencing. Genomes from the 2 HCWs are highlighted in red. (B) Genomic alignment of the 2 HCW genomes that shows the amino acid changes compared to the reference genome using Nextclade version 1.5.2 software. Amino acid changes are shown as colored vertical lines and dark gray bars indicate genomic gaps or deletions. The inset of the spike region shows the amino acid changes carried by the 2 HCW genomes including the S: T859I which was exclusively detected in these 2 genomes compared to the whole cohort.