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Microbial dynamics in combinations of forage cactus and sorghum silage as a function of aerobic exposure and faecal contamination

Published online by Cambridge University Press:  17 April 2026

Evandro de Sousa da Silva
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Alberto Jefferson da Silva Macêdo*
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Juliana Silva de Oliveira
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Guilherme Medeiros Leite
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Paloma Gabriela Batista Gomes
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Gilvânia Avelino da Costa
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Ricardo Loiola Edvan
Affiliation:
Department of Animal Science, Federal University of Piauí, Brazil
Geovergue Rodrigues de Medeiros
Affiliation:
Animal production, Semi-Arid National Institute, Brazil
Luís Fernando Batista Pinto
Affiliation:
Department of Animal Science, Federal University of Bahia, Brazil
Chrislanne Barreira de Macêdo Carvalho
Affiliation:
Animal production, Semi-Arid National Institute, Brazil
Mateus Lacerda Pereira Lemos
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
Edson Mauro Santos
Affiliation:
Department of Animal Science, Federal University of Paraíba, Brazil
*
Corresponding author: Alberto Jefferson da Silva Macêdo; Email: macedoajs@gmail.com
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Abstract

This study evaluated the dynamics of the bacterial community in mixtures of forage cactus and sorghum silage at different proportions, subjected to aerobic exposure periods, without or with faecal contamination. The experimental design was completely randomized in a 2 × 2 × 4 factorial arrangement, with two forage cactus proportions (20 and 80 %), absence or presence of faecal contamination and four aerobic exposure times (0, 6, 12 and 24 h). Fermentation profile, chemical composition, microbial populations and bacterial diversity were evaluated. A higher proportion of forage cactus resulted in increased pH and greater proliferation of enterobacteria, with detection of Escherichia coli after aerobic exposure. In contrast, mixtures containing 20 % forage cactus and 80 % sorghum silage showed greater fermentative stability, characterized by higher lactic acid production, reduced growth of potentially pathogenic microorganisms and lower abundance of undesirable bacterial groups after 24 h of exposure. The combination of 20 % forage cactus and 80 % sorghum silage was more effective in preserving the microbiological and fermentative quality of the mixture during aerobic exposure.

Information

Type
Silage Research Paper
Copyright
© The Author(s), 2026. Published by Cambridge University Press
Figure 0

Table 1. Characterization of the fresh forage cactus and the forage sorghum silage used in the experiment

Figure 1

Table 2. P-value of the F-tests for the effects of forage cactus proportion (FC), goat faeces contamination (C), aerobic exposure time (T), interaction between forage cactus proportion and goat faeces contamination (FC × C), interaction between forage cactus proportion and aerobic exposure time (FC × T), interaction between goat faeces contamination and aerobic exposure time (C × T), and the three-way interaction between forage cactus proportion, goat faeces contamination, and aerobic exposure time (FC × C × T)

Figure 2

Table 3. Mean values and standard errors of the bromatological composition variables, considering the effects of forage cactus (FC), goat faeces contamination (C), aerobic exposure times (T), and the interaction between the factors

Figure 3

Table 4. Mean values and standard errors of the pH and organic acids (g/kg) variables, considering the effects of forage cactus (FC), goat faeces contamination (C), aerobic exposure times (T), and the interaction between the factors

Figure 4

Figure 1. Enterobacteria (ENT) population (log10 CFU/g) in mixtures of forage cactus and forage sorghum silage with or without goat faecal contamination over 24 h of aerobic exposure. CFU = colony-forming unit.

Figure 5

Figure 2. Escherichia coli population (log10 CFU/g) in mixtures of forage cactus and forage sorghum silage with or without goat faecal contamination over 24 h of aerobic exposure. CFU = colony-forming unit.

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Figure 3. Rarefaction curves of bacterial communities in mixtures of forage cactus (FC) and forage sorghum silage (S): 20% FC + 80% S (Figure 3A) and 80% FC + 20% S (Figure 3B), with or without contamination (control vs. inoculated) at 0 and 24 h of aerobic exposure. Curves reached asymptotes, indicating that sequencing depth was sufficient to capture microbial diversity. The vertical line represents the rarefaction threshold (19,200 reads).

Figure 7

Figure 4. Alpha diversity indices in mixtures of forage cactus (FC) and forage sorghum silage (S): 80 % FC (Figure 4A) and 20 % FC (Figure 4B), with or without goat faecal contamination at 0 and 24 h of aerobic exposure.

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Figure 5. Beta diversity PCoA plots using weighted and unweighted UniFrac metrics: 80 % forage cactus (FC) (Figure 5A) and 20 % FC (Figure 5B), showing clustering patterns based on contamination and aerobic exposure time.

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Figure 6. Relative abundance of major bacterial phyla in mixtures with 80 % (Figure 6A) and 20 % (Figure 6B) forage cactus (FC), with or without goat faecal contamination at 0 and 24 h of aerobic exposure.

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Figure 7. Relative abundance of main bacterial families in mixtures with 80 (Figure 7A) and 20 % (Figure 7B) forage cactus (FC) under contamination and exposure conditions.

Figure 11

Figure 8. Relative abundance of the 13 most abundant bacterial genera in 80 (Figure 8A) and 20 % (Figure 8B) forage cactus (FC) mixtures at 0 and 24 h of exposure, with or without goat faecal contamination.

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