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Shape design for stabilizing microparticles in inertial microfluidic flows

Published online by Cambridge University Press:  14 January 2020

Aditya Kommajosula
Affiliation:
Department of Mechanical Engineering, Iowa State University, Ames, IA50011, USA
Daniel Stoecklein
Affiliation:
Department of Bioengineering, University of California, Los Angeles, CA90095, USA
Dino Di Carlo
Affiliation:
Department of Bioengineering, University of California, Los Angeles, CA90095, USA
Baskar Ganapathysubramanian*
Affiliation:
Department of Mechanical Engineering, Iowa State University, Ames, IA50011, USA
*
†Email address for correspondence: baskarg@iastate.edu

Abstract

Design of isolated microparticles which stabilize at the centreline of a channel flow is examined numerically, for moderate Reynolds numbers ($10\leqslant Re\leqslant 80$). This problem is motivated by the need for the design of shaped particle carriers for use in next generation microfluidic cell analysis devices. Stability metrics for particles with arbitrary shapes are formulated based on linear stability theory. Particle shape is parametrized by a compact, non-uniform rational B-spline-based representation. Shape design is posed as an optimization problem and solved using adaptive Bayesian optimization. We focus on designing particles for stability at the channel centreline robust to perturbations. Our results indicate that centreline focusing particles are families of characteristic ‘fish’/‘bottle’/‘dumbbell’-like shapes, exhibiting fore–aft asymmetry. A parametric exploration is then performed to identify stable particle designs at different $k$ values (particle chord-to-channel width ratio) and $Re$ values ($0.1\leqslant k\leqslant 0.4,10\leqslant Re\leqslant 80$). Particles at high $k$ values and $Re$ values are highly stabilized when compared to those at low $k$ values and $Re$ values. We validate the performance of designed particles to perturbations in flow using detailed fluid–structure interaction simulations over different $k$ values and $Re$ values. We identify a basin of attraction around the centreline, within which any arbitrary release results in rotationally stable centreline focusing. We find that this basin spans larger release angle ranges and lateral locations (tending to the channel width) for narrower channels. This effectively standardizes the notion of global focusing using the current stability paradigm in narrow channels, which eliminates the need for an independent design for global focusing in such configurations. The framework detailed in this work is illustrated for two-dimensional cases and is generalizable to stability in three-dimensional flow fields. The current formulation is agnostic to $Re$ and particle/channel geometry, which indicates substantial potential for integration with imaging flow cytometry tools and microfluidic biosensing assays.

Information

Type
JFM Papers
Copyright
© 2020 Cambridge University Press
Figure 0

Figure 1. Computational model: sample geometry with 8 control points (number of variables $(nv)=6$) and mesh for an arbitrary-shaped particle (the numbered red dots represent non-uniform rational B-spline (NURBS) control points and blue dashed lines represent the hull; confinement, $k=a/H,Re=\unicode[STIX]{x1D70C}UH/\unicode[STIX]{x1D707}$).

Figure 1

Figure 2. Quasi-dynamic (QD) method: for perturbed locations of the particle, identify streamwise particle velocity to yield zero drag, and compute resultant lifts and torques. See text below for further details about the QD method.

Figure 2

Figure 3. Designed particle shapes: for $k=0.3,Re=20$: (a) ‘fish’-like and non-‘fish’ like shapes; (b) pressure contours from QD approach to perturbations in $y$ and $\unicode[STIX]{x1D703}$.

Figure 3

Figure 4. Phase portraits: in the $y_{p}-\unicode[STIX]{x1D703}_{p}$ space for different initial release locations at $k=0.3,Re=20$ – (a–c): highly stable, weakly stable and unstable particles, respectively (quivers indicate vectors: (torque, lift), basins enclosed within green-dashed lines).

Figure 4

Figure 5. Validation with FSI: designed/randomly shaped particles are perturbed by $-10^{\circ }$ at the centreline and flowed computationally to observe their linear/angular positions over time for $k=0.3,Re=20$ – on the left and the middle, highly stable and weakly stable; on the right, a randomly shaped, unstable particle (coloured by fluid-velocity contours, $t^{\ast }=tU/H$, denotes non-dimensional time).

Figure 5

Figure 6. Validation of designed particles with transient FSI: trajectories for highly stable, weakly stable and unstable shapes ($k=0.3,Re=20$) in (a) $y_{p}-$trajectories; (b) $\unicode[STIX]{x1D703}_{p}-$trajectories; and (c) $y_{p}-$trajectories for highly versus weakly stable particles (released at the channel centreline, $y_{p}=0$, for an angular perturbation of $\unicode[STIX]{x1D703}_{p}=-10^{\circ }$, animations in Movie 1, Movie 2, Movie 3, respectively).

Figure 6

Table 1. Mean aspect ratios of best shapes from figure 7.

Figure 7

Figure 7. Families of stable shapes for centreline alignment: $0.1\leqslant k\leqslant 0.4,10\leqslant Re\leqslant 80$. The 10 most-stable shapes per configuration are shown (shapes to scale).

Figure 8

Figure 8. Families of stable shapes for centreline alignment: $0.1\leqslant k\leqslant 0.4,10\leqslant Re\leqslant 80$. Ten shapes are shown for each ($k$, $Re$), ranging between the most stable to least stable per configuration (shapes to scale).

Figure 9

Figure 9. Phase portraits: in the $y_{p}-\unicode[STIX]{x1D703}_{p}$ space for different initial release locations at $k=0.5,Re=10$ (quivers indicate vectors: (torque, lift), basins enclosed within green lines).

Figure 10

Figure 10. Validation with FSI: for $k=0.4,Re=20$ (a) stable shape; (b) unstable shape; (c) $y_{p}$-trajectories; and (d) $\unicode[STIX]{x1D703}_{p}$-trajectories (released at the channel centreline, $y_{p}=0$, for an angular perturbation of $\unicode[STIX]{x1D703}_{p}=-10^{\circ }$, animations in Movie 4, Movie 5, respectively).

Figure 11

Figure 11. Validation with FSI: for $k=0.4,Re=80$ (a) stable shape; (b) unstable shape; (c) rod–disk shape; (d) $y_{p}$-trajectories; and (e) $\unicode[STIX]{x1D703}_{p}$-trajectories (released at the channel centreline, $y_{p}=0$, for an angular perturbation of $\unicode[STIX]{x1D703}_{p}=-20^{\circ }$ for the stable particle, $\unicode[STIX]{x1D703}_{p}=-10^{\circ }$ for the unstable particle, and $\unicode[STIX]{x1D703}_{p}=-20^{\circ }$ for the rod–disk particle, animations in Movie 6, Movie 7, respectively).

Figure 12

Figure 12. Validation with FSI: for $k=0.7,Re=20$ (a) stable shape-1; (b) stable shape-2; (c) unstable shape; (d) $y_{p}$-trajectories; and (e) $\unicode[STIX]{x1D703}_{p}$-trajectories (released at $y_{p}=0.1a$, for an angular perturbation of $\unicode[STIX]{x1D703}_{p}=0^{\circ }$, animations in Movie 8, Movie 9, Movie 10, respectively).

Figure 13

Figure 13. Validation for QD: lift variation in half-channel for $k=0.15$ at $Re_{p}=$ (a) 1.667; (b) 15; and (c) 37.5.

Figure 14

Table 2. Equilibrium values for $Re_{p}=15$ ($r_{eq},u_{p},u_{f},\unicode[STIX]{x1D714}_{p},\text{d}u/\text{d}y$ denote, respectively, stable location, particle linear velocity, undisturbed fluid velocity at centroid height of particle, angular velocity of particle and velocity gradient at particle centroid).

Figure 15

Table 3. Eigenvalues for elliptical particle in channel flow at centreline for two ($XZ$) symmetric orientations (bold values correspond to unstable orientations).

Figure 16

Table 4. Eigenvalues for sedimenting elliptical particle at centreline for two ($XY$) symmetric orientations (flow direction along $Y$; values in bold indicate unstable orientations).

Figure 17

Table 5. Non-dimensional lift gradients, $\text{d}L^{\ast }/\text{d}y^{\ast }$, evaluated for a circular particle at the stable equilibrium point, at select confinements, $k$, and Reynolds numbers, $Re$ (the negative sign indicates a restoring lift) – used for computing damping coefficients of non-circular shapes by means of a dynamic-shape factor (Leith 1987).

Figure 18

Figure 14. Two-variable optimization: optimization of $y_{4}$ and $y_{7}$. Each dot represents a function evaluation using adaptive sampling via Bayesian optimization (60 function evaluations), while the underlying contour represents the original cost function surface (400 uniformly distributed function evaluations). Particle shapes corresponding to selected sampling locations are shown (colour coded).

Figure 19

Figure 15. Best shapes without regularization: with ‘nv’ = (a) 4; (b) 6; (c) 10; and (d) 14 (the legend indicates normalized maximum of eigenvalue real parts ($\unicode[STIX]{x1D706}_{max}/kRe$) – larger absolute values mean higher stability).

Figure 20

Figure 16. Best shapes with scaled-curvature penalty: (a) ‘nv’ = 6 without regularization; (b) ‘nv’ = 10 with regularization (the legend indicates normalized maximum of eigenvalue real parts ($\unicode[STIX]{x1D706}_{max}/kRe$) – larger absolute values mean higher stability).

Figure 21

Figure 17. Best shapes with log-curvature penalty: (a) ‘nv’ = 6; (b) ‘nv’ = 10 (the legend indicates normalized maximum of eigenvalue real parts ($\unicode[STIX]{x1D706}_{max}/kRe$) – larger absolute values mean higher stability).

Figure 22

Figure 18. Particle trajectories (Fluent with 147 k elements and reference).

Figure 23

Figure 19. (a) Lateral location with time, (b) orientation with time (Fluent and reference; ‘T’ refers to one time period of rotation).

Figure 24

Figure 20. (a) Spatial convergence, (b) temporal convergence (147 000 elements).

Kommajosula et al. supplementary movie 1

Long channel FSI simulation for highly stable particle at Re = 20, k = 0.3 (angular perturbation)

Download Kommajosula et al. supplementary movie 1(Video)
Video 4.7 MB

Kommajosula et al. supplementary movie 2

Long channel FSI simulation for weakly stable particle at Re = 20, k = 0.3 (angular perturbation)

Download Kommajosula et al. supplementary movie 2(Video)
Video 5.8 MB

Kommajosula et al. supplementary movie 3

Long channel FSI simulation for unstable particle at Re = 20, k = 0.3 (angular perturbation)

Download Kommajosula et al. supplementary movie 3(Video)
Video 5.9 MB

Kommajosula et al. supplementary movie 4

Long channel FSI simulation for stable particle at Re = 20, k = 0.4 (angular perturbation)

Download Kommajosula et al. supplementary movie 4(Video)
Video 3.1 MB

Kommajosula et al. supplementary movie 5

Long channel FSI simulation for unstable particle at Re = 20, k = 0.4 (angular perturbation)

Download Kommajosula et al. supplementary movie 5(Video)
Video 3 MB

Kommajosula et al. supplementary movie 6

Long channel FSI simulation for stable particle at Re = 80, k = 0.4 (angular perturbation)

Download Kommajosula et al. supplementary movie 6(Video)
Video 1.2 MB

Kommajosula et al. supplementary movie 7

Long channel FSI simulation for unstable particle at Re = 80, k = 0.4 (angular perturbation)

Download Kommajosula et al. supplementary movie 7(Video)
Video 1.3 MB

Kommajosula et al. supplementary movie 8

Long channel FSI simulation for stable particle-1 at Re = 20, k = 0.7 (lateral perturbation)

Download Kommajosula et al. supplementary movie 8(Video)
Video 1.6 MB

Kommajosula et al. supplementary movie 9

Long channel FSI simulation for stable particle-2 at Re = 20, k = 0.7 (lateral perturbation)

Download Kommajosula et al. supplementary movie 9(Video)
Video 1.6 MB

Kommajosula et al. supplementary movie 10

Long channel FSI simulation for unstable particle at Re = 20, k = 0.7 (lateral perturbation)

Download Kommajosula et al. supplementary movie 10(Video)
Video 1.7 MB