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The trans-riverine genetic structure of 28 Amazonian frog species is dependent on life history

Published online by Cambridge University Press:  08 June 2015

Antoine Fouquet*
Affiliation:
CNRS Guyane USR3456, Immeuble Le Relais, 2 Avenue Gustave Charlery, 97300, Cayenne, French Guiana
Elodie A. Courtois
Affiliation:
CNRS Guyane USR3456, Immeuble Le Relais, 2 Avenue Gustave Charlery, 97300, Cayenne, French Guiana
Daniel Baudain
Affiliation:
25 lot. Emilio Pascal, 97313, St Georges de l'Oyapock
Jucivaldo Dias Lima
Affiliation:
Centro de Pesquisas Zoobotânicas e Geologicas (CPZG), Divisão de Zoologia, Macapá, AP, Brazil
Sergio Marques Souza
Affiliation:
Universidade de São Paulo, Instituto de Biociências, Departamento de Zoologia, Caixa Postal 11.461, CEP 05508-090, São Paulo, SP, Brazil
Brice P. Noonan
Affiliation:
University of Mississippi, Biology, Box 1848, University, MS 38677, USA
Miguel T. Rodrigues
Affiliation:
Universidade de São Paulo, Instituto de Biociências, Departamento de Zoologia, Caixa Postal 11.461, CEP 05508-090, São Paulo, SP, Brazil
*
1Corresponding author. Email: fouquet.antoine@gmail.com
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Abstract:

Among the hypotheses formulated to explain the origin of Amazonian biodiversity, two (the riverine-barrier and the river-refuge hypotheses) focus on the role that rivers play as biotic barriers promoting speciation. However, empirical results have both supported and refuted these hypotheses. This is likely due, at least in part, to river-specific hydrologic characteristics and the biology of the focal species. The rivers of the Guiana Shield represent a model system because they have had more stable courses over time than those of the western Amazon Basin, where most tests of riverine barrier effects have taken place. We tested whether life-history traits (body size, habitat and larval development), expected to be important in determining dispersal ability, of 28 frog species are associated with genetic structure and genetic distances of individuals sampled from both banks of the Oyapock River. Thirteen of these species displayed genetic structure consistent with the river acting as a barrier to dispersal. Surprisingly, body size was not correlated with trans-riverine population structure. However, leaf-litter dwellers and species lacking free-living tadpoles were found to exhibit higher river-associated structure than open habitat/arboreal species and those with exotrophic tadpoles. These results demonstrate that rivers play an important role in structuring the genetic diversity of many frog species though the permeability of such riverine barriers is highly dependent on species-specific traits.

Information

Type
Research Article
Copyright
Copyright © Cambridge University Press 2015 
Figure 0

Figure 1. Map of the study area encompassing French Guiana and Amapá State (Brazil) with localities where frogs were sampled indicated with coloured circles and simplified drainage of the Oyapock River (yellow). Examples of two hypothetical topologies are illustrated on the top right corner indicative of a barrier effect of the river (topologies A and B) and three examples of topologies indicative of trans-riverine affinities (topology 0) are indicated below. Two dots in the same terminal indicate that the prediction will be the same regardless of the position of the samples.

Figure 1

Figure 2. Phylogenetic relationship among the focal frog species sampled from opposite banks of the Oyapock River (from Pyron & Wiens (2011) and Fouquet et al. (2013)). For each species, the coded life-history traits are indicated before the species name with coloured symbols (triangle, square, diamond) and the categorical results from the molecular analyses analyses are indicated after the species names with coloured circles.

Figure 2

Table 1. Table summarizing the results from the molecular analyses and the coding of the life history traits for each focal frog species sampled on each bank of the Oyapock River: species identification (sample size = n), the three trait modalities (Development, Habitat, Body size), p-distances between samples from opposite margins, topology recovered from the phylogenetic analysis (A and B are indicative of a genetic structure matching the course of the river while 0 are not).

Figure 3

Figure 3. Box plots comparing genetic distances to developmental (classical in red and direct/endo./phyt. in blue) (a) and habitat traits (arboreal in red, forest litter in blue and open habitat in yellow) (b); and genetic structure classification to developmental (c) and habitat traits (d) of focal frog species sampled from opposite banks of the Oyapock River. The proportion of species with barrier effect is indicated with solid colours and the proportion of species with no barrier effect in white (c, d).

Figure 4

Appendix 1. Frog samples from French Guiana (left bank of the Oyapock River) and Amapá State (Brazil) (right bank of the Oyapock River) included in the molecular analyses: species identification, field numbers, locality, geographic coordinates and GB accession numbers.

Figure 5

Appendix 2. Subtrees obtained from a Bayesian analysis of a single alignment of a 16S fragment for each frog species sampled at the border between French Guiana and Amapà State, Brazil, i.e. on each side of the Oyapock River. Posterior probabilities (×100) of each branch are indicated, with asterisks when posterior probability = 1. Coloured symbols correspond to the localities (cf. Figure 1). Species names in red (left) are the ones displaying trans-riverine population structure (topologies A, B). Species names in blue (right) are the ones with no trans-riverine population structure.