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Host associations, biogeography, and phylogenetics of avian malaria in southern African waterfowl

Published online by Cambridge University Press:  12 October 2012

GRAEME S. CUMMING*
Affiliation:
Percy FitzPatrick Institute, DST/NRF Centre of Excellence, University of Cape Town, Rondebosch, Cape Town 7701, South Africa
ERIC SHEPARD
Affiliation:
Department of Biological Sciences, 3640 Colonel Glenn Highway, Wright State University, Dayton, OH 45435, USA
SHARON OKANGA
Affiliation:
Percy FitzPatrick Institute, DST/NRF Centre of Excellence, University of Cape Town, Rondebosch, Cape Town 7701, South Africa
ALEXANDRE CARON
Affiliation:
Cirad, UPR AGIRs, Harare, Zimbabwe Cirad, UPR AGIRs, Montpellier, France
MDUDUZI NDLOVU
Affiliation:
Percy FitzPatrick Institute, DST/NRF Centre of Excellence, University of Cape Town, Rondebosch, Cape Town 7701, South Africa
JEFFREY L. PETERS
Affiliation:
Department of Biological Sciences, 3640 Colonel Glenn Highway, Wright State University, Dayton, OH 45435, USA
*
*Corresponding author: Percy FitzPatrick Institute, DST/NRF Centre of Excellence, University of Cape Town, Rondebosch, Cape Town 7701, South Africa. E-mail: gscumming@gmail.com
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Summary

The relevance of spatial variation in the environment and host communities for parasite community composition is poorly documented, creating a need for additional case studies from which general principles can be developed. Avian malaria in southern African waterfowl has not previously been studied. As a first step towards documenting and understanding its biogeography, we used PCR and molecular sequencing techniques to analyse 454 blood samples from Afrotropical ducks from 5 different locations (spread around the subregion) for avian malaria. Fifty-five blood samples were positive for one or more genera of haematozoa. The regional infection rate across all sites and sampling periods was 12·1%. Nine individuals carried dual infections containing multiple haematozoa. Fifteen different cytochrome b haplotypes among 52 positives (3 samples failed to sequence) and 61 total sequences were found. Eleven haplotypes closely matched Plasmodium, whereas 4 were more similar to Haemoproteus. Five distinct haematozoan clades were identified. Haemoproteus parasites appeared to be more host-specific than Plasmodium, which occurred at every sampling location and in every host species examined. There were no significant differences in overall parasite prevalence attributable to either site or species, although Plasmodium and Haemoproteus occurrences differed by site-species combination and the borderline significance of our test for between-site variation (P < 0·06) implied that with a larger sample size, differences in parasite prevalence among locations might be detectable.

Information

Type
Research Article
Copyright
Copyright © Cambridge University Press 2012
Figure 0

Fig. 1. Locations in southern Africa from which blood samples were collected. In each case, the centre of the pie chart matches the location of the site. Pie size is proportional to the number of samples that were tested; red shading indicates the number of samples that were positive for any haematozoa and white shading indicates negatives. Actual numbers are given in Table 1. Distances on the Scale bar are in kilometres.

Figure 1

Table 1. Results, by site and species, giving the number of birds sampled of each species and the number that were positive for the genera Plasmodium and Haemoproteus

(Blank entries indicate zero prevalence rather than missing data. For clarity, the dual and unidentified infections were excluded from this table. Site names are STR, Strandfontein; BAR, Barberspan; MAN, Lake Manyame; CHI, Lake Chivero (MAN and CHI were merged into ZIM for the analysis); NGA, Lake Ngami; CHU, Lake Chuali.)
Figure 2

Fig. 2. Bayesian phylogenetic tree of mtDNA cytochrome b haplotypes obtained from haematozoa sample from waterfowl (pinvar = 0·46, alpha = 0·091). Sample names ending in an A or B indicate individuals that were infected by multiple haplotypes. Letters next to each vertical line indicate specific mtDNA lineages supported by >95% bootstrap support and that are referenced in the text. The horizontal dashed line separates Plasmodium and Haemoproteus haplotypes. The first 2 letters in each label indicate host species; Cape Shoveler (CS), Cape Teal (CT), Red-billed Teal (RT), Hottentot Teal (HT), Egyptian Goose (EG), Spur-winged Goose (SW), and White-faced Whistling Duck (WF). Numbers above branches indicate posterior nodal support.

Figure 3

Fig. 3. Haematozoa infections by (A) location and (B) host species. The numbers above each column indicate the number of positive samples and the number that were tested.

Figure 4

Fig. 4. Bayesian phylogeny of 128 mtDNA cytochrome b haplotypes isolated from southern African birds (pinvar = 0·29, alpha = 0·11). Monophyletic clades for Anseriformes isolates (white triangles) and Passeriformes (black triangles) were collapsed for clarity (the asterisk (*) indicates one Passeriformes clade that included a haplotype shared with a single isolate from Pelecaniformes). The triangles illustrate the abundance (height) of the clade and the deepest divergence (width) within the clade. One clade (grey triangle) contained Plasmodium spp. isolated from both Anseriformes and Passeriformes, including a haplotype that was shared between these orders. Numbers above branches indicate posterior nodal support.