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Wavelet transforms and their applications to MHD and plasma turbulence: a review

Published online by Cambridge University Press:  12 October 2015

Marie Farge
Affiliation:
LMD-CNRS, Ecole Normale Supérieure 24, Rue Lhomond, 75231 Paris CEDEX 6, France
Kai Schneider*
Affiliation:
M2P2-CNRS, Aix-Marseille Université 38, Rue Frédéric Joliot-Curie, 13451 Marseille CEDEX 13, France
*
†Email address for correspondence: kschneid@cmi.univ-mrs.fr
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Abstract

Wavelet analysis and compression tools are reviewed and different applications for the study of MHD and plasma turbulence are presented. We introduce the continuous and the orthogonal wavelet transform and detail several statistical diagnostics based on the wavelet coefficients. We then show how to extract coherent structures out of fully developed turbulent flows using wavelet-based denoising. Finally some multiscale numerical simulation schemes using wavelets are described. Several examples for analysing, compressing and computing one-, two- and three-dimensional turbulent MHD or plasma flows are presented.

Information

Type
Research Article
Copyright
© Cambridge University Press 2015 
Figure 0

Figure 1. Wavelet representation. Physical space (a) and spectral space (b). Note that ${\rm\Delta}x{\rm\Delta}k>C$ is due to the Fourier uncertainty principle.

Figure 1

Figure 2. Space-scale representation of an orthogonal spline wavelet at three different scales and positions, i.e. ${\it\psi}_{6,6},{\it\psi}_{7,32},{\it\psi}_{8,108}$. The modulus of the Fourier transform of three corresponding wavelets is shown in the inset (top, left).

Figure 2

Figure 3. Academic example: function with two discontinuities and one in its derivative (a), corresponding modulus of orthogonal wavelet coefficients (b) in logarithmic scale using periodic spline wavelets of degree five.

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Figure 4. Two-dimensional orthogonal wavelets. Scaling function (a) and the three associated directional wavelets in the horizontal (b), vertical (c) and diagonal (d) direction.

Figure 4

Figure 5. Quasi-static-three-dimensional-MHD: modulus of vorticity for quasi-static three-dimensional MHD at $R_{{\it\lambda}}=235$, with $N=0$, (a) and $N=2$ (b) computed by DNS (from Okamoto et al.2014).

Figure 5

Figure 6. Quasi-static-three-dimensional-MHD: wavelet mean energy spectra (a) $k_{j}^{5/3}E^{\bot }(k_{j})$ together with the Fourier energy spectra (solid lines). Wavelet standard deviation spectra (b) $k_{j}^{5/3}{\it\sigma}^{\bot }(k_{j})$. All quantities are shown for the perpendicular velocity components. The inset (left) shows the corresponding forcing Fourier spectra $k^{5/3}E_{f}(k)$ (from Okamoto et al.2014).

Figure 6

Figure 7. Quasi-static-three-dimensional-MHD: component-wise anisotropy measure $c_{E}(k_{j})$ (a) and directional anisotropy measure in the longitudinal direction $d_{E}^{L}(k_{j})$ (from Okamoto et al.2014).

Figure 7

Figure 8. Quasi-static-three-dimensional-MHD: scale-dependent flatness of the perpendicular velocity $F_{j}^{\bot }$ with in the inset the corresponding flatness for the parallel velocity (a). Anisotropic measure of intermittency ${\it\Lambda}(k_{j})$ (b) (from Okamoto et al.2014).

Figure 8

Figure 9. Three-dimensional-MHD: scale-dependent PDFs of the relative helicities. Cross-helicity $h_{j}^{C}$ (a) and magnetic helicity $h_{j}^{M}$ (b). The insets show the PDFs of the corresponding total relative helicities (from Yoshimatsu et al.2011).

Figure 9

Figure 10. Denoising of a piecewise regular signal using iterative wavelet thresholding. (a) Original academic signal $a(t)$. (b) Noisy signal $s(t)$ with a $\text{SNR}=11\;\text{dB}$. (c) Denoised signal $s^{C}(t)$ with a $\text{SNR}=28\;\text{dB}$.

Figure 10

Figure 11. (a) Position of the reciprocating Langmuir probe in the scrape-off layer of the tokamak Tore Supra in Cadarache. (b) Schematic top view of the probe.

Figure 11

Figure 12. Signal $s(t)$ of duration 8.192 ms, corresponding to the saturation current fluctuations measured at 1 MHz in the scrape-off layer of the tokamak Tore Supra (Cadarache, France). (a) Total signal $s$, (b) coherent part $s_{C}$, and (c) incoherent part $s_{I}$ (from Farge et al.2006).

Figure 12

Figure 13. Probability density function $p(s)$ estimated using histograms with 50 bins. PDF of the total signal $s$ (green dashed line), of the coherent component $s_{C}$ (red solid line) and of the incoherent component $s_{I}$ (blue dotted line), together with a Gaussian fit with variance ${\it\sigma}_{I}^{2}$ (black dotted line) (from Farge et al.2006).

Figure 13

Figure 14. (a) Wavelet spectra $\widetilde{E}({\it\omega}_{j})$ (lines with symbols) and modified periodograms $E({\it\omega})$ (lines) of the total signal $s$ (green and $+$), coherent signal $s_{C}$ (red and ♢) and incoherent signal $s_{I}$ (blue and ○). (b) Corresponding scale-dependent flatness $\widetilde{F}$ versus frequency ${\it\omega}_{j}$. The horizontal dotted line $\widetilde{F}({\it\omega}_{j})=3$ corresponds to the flatness of a Gaussian process (from Farge et al.2006).

Figure 14

Figure 15. Energy flux: total (green), coherent (red) and incoherent (blue). The split is made using complex valued wavelets.

Figure 15

Figure 16. Denoising WVD academic test case with a uniform radiating shell. (a) Source emission intensity $S$ in the poloidal plane. (b) Corresponding noiseless image $I=KS$ in the image plane. (c) Noisy image obtained by adding Gaussian white noise with variance 0.5 (from Nguyen van yen et al.2012).

Figure 16

Figure 17. Denoising WVD academic test case. WVD inversion results. (a) Reconstructed poloidal emissivity map $S_{d}$. (b) Denoised image $I_{d}=KS_{d}$ (from Nguyen van yen et al.2012).

Figure 17

Figure 18. WVD-inversion of a snapshot from a movie obtained from Tore Supra, discharge TS42967. (a) Noisy frame used as input for the WVD algorithm. (b) Reconstructed emissivity map obtained as a result of WVD. (c) Denoised frame obtained by applying the operator $K$ to the reconstructed emissivity map (from Nguyen van yen et al.2012).

Figure 18

Figure 19. Snapshots of the vorticity field for the quasi-hydrodynamic case (a) and for the quasi-adiabatic case (b). Abscissa and ordinate correspond to the radial and poloidal position, respectively. The white rectangles indicate the selected dipoles (from Bos et al.2008).

Figure 19

Figure 20. (a,b) PDFs of the vorticity. (c,d) Fourier spectrum of the enstrophy versus wavenumber. (a,c) Quasi-hydrodynamic case. (b,d) Quasi-adiabatic case. Dashed line: total field, solid line: coherent part, dotted line: incoherent part. Note that the coherent contribution (solid) superposes the total field (dashed), which is thus hidden under the solid line in all four figures. The straight lines indicating power laws are plotted for reference (from Bos et al.2008).

Figure 20

Figure 21. Scatter plot of vorticity against electrostatic potential for the coherent part (a,b) and incoherent part (c,d). (a,c) Quasi-hydrodynamic case; (b,d) quasi-adiabatic case. The red dots correspond to the total field, the blue dots correspond to a selected vortex dipole in figure 19 (from Bos et al.2008).

Figure 21

Figure 22. Isosurfaces of vorticity (a,c,e) and current density (b,d,f) of the total (a,b), coherent (c,d) and incoherent contributions (e,f) (from Yoshimatsu et al.2009b).

Figure 22

Figure 23. Kinetic (a) and magnetic (b) energy spectra of the total, coherent and incoherent fields. The wavenumber is normalized with the Iroshnikov–Kraichnan scale (from Yoshimatsu et al.2009b).

Figure 23

Figure 24. PDFs of the $\ell$th component of the velocity (a), vorticity (b), magnetic field (c) and current density (d) for the total, coherent and incoherent contributions (from Yoshimatsu et al.2009b).

Figure 24

Figure 25. Contributions to the energy flux normalized by the energy dissipation rate versus the wavenumber, which is normalized with the Iroshnikov–Kraichnan scale (from Yoshimatsu et al.2009b).

Figure 25

Figure 26. Scale-dependent flatness of velocity (a) and magnetic field (b) versus the wavenumber, which is normalized with the Iroshnikov–Kraichnan scale (from Yoshimatsu et al.2009b).

Figure 26

Figure 27. Contour plots of estimates of ${\it\delta}f$ for the collisional guiding centre transport particle data: histogram method (a–c) and WBDE method (d–f). The (a–f) correspond to $N_{p}=32\times 10^{3}$ (a,d), $N_{p}=128\times 10^{3}$ (b,e) and $N_{p}=1024\times 10^{3}$ (c,f), respectively. The plots show $17$ isolines equally spaced within the interval $[0.5,0.5]$ (from Nguyen van yen et al.2010).

Figure 27

Figure 28. R.m.s. error estimate for collisional guiding-centre transport particle data according to the histogram, the proper orthogonal decomposition (POD), and the wavelet methods. The reference density is computed with $N_{p}=1024\times 10^{3}$ (from Nguyen van yen et al.2010).

Figure 28

Figure 29. Comparisons between PIW and PIC for the two stream instability test case. Relative $L^{2}$ error of the electric field at $t=30$, as a function of the number of particles (a) and the corresponding computing time (b). Note that L-PIW (linear PIW) is a variant of PIW where only linear filtering has been applied (from Nguyen van yen et al.2011).

Figure 29

Figure 30. Illustration of the safety zone in wavelet coefficient space used in CVS. The degrees of freedom retained by CVE are drawn in red, the adjacent coefficients of the safety zone are drawn in green, while the coefficients in blue correspond to the inactive degrees of freedom which are not computed. The interface ${\it\eta}$, defined in space and scale, separates the region dominated by nonlinear interaction (red) from the region dominated by linear dissipation (blue). The horizontal green line corresponds to the Kolmogorov dissipation scale $\langle {\it\eta}\rangle$ is defined by the statistical mean (either ensemble or space average).

Figure 30

Figure 31. Flowchart describing the principle of CVCS. The superscripts $n$ and $n+1$ denote time steps. FWT and $\text{FWT}^{-1}$ denote the fast wavelet transform and its inverse. Operators performed in wavelet coefficient space are framed by the dashed rectangle (from Yoshimatsu et al.2013).

Figure 31

Figure 32. Adaption strategy in wavelet coefficient space used in CVCS: (a) retained wavelet coefficients (blue), (b) added wavelet coefficients to ensure a graded tree (red) and (c) added wavelet coefficients corresponding to the safety zone (green).

Figure 32

Figure 33. Evolution of the percentage $C$ of retained wavelet coefficients for CVCS with three different adaption strategies in comparison with Fourier filtering (FT0) with a fixed cutoff wavenumber (from Yoshimatsu et al.2013).

Figure 33

Figure 34. Percentage of retained kinetic energy (a), magnetic energy (b), kinetic enstrophy (c) and magnetic enstrophy (d) for the three different CVCS strategies in comparison with Fourier filtering (FT0) (from Yoshimatsu et al.2013).

Figure 34

Figure 35. PDFs of the $\ell$th component of vorticity (a) and current density (b) normalized by the corresponding standard deviation (from Yoshimatsu et al.2013).

Figure 35

Figure 36. Kinetic (a) and magnetic energy spectra (b). The wavenumber is normalized with the Iroshnikov–Kraichnan scale (from Yoshimatsu et al.2013).

Figure 36

Figure 37. Visualization of isosurfaces of modulus of vorticity (a,b) and modulus of current density (c,d) for DNS (a,c) and CVCS0 (b,d) (from Yoshimatsu et al.2013).