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The microorganisms of cryoconite holes (algae, Archaea, bacteria,cyanobacteria, fungi, and Protista): a review

Published online by Cambridge University Press:  14 September 2015

Łukasz Kaczmarek
Affiliation:
Department of Animal Taxonomy and Ecology, Adam Mickiewicz University in Poznań, Umultowska 89, 61–614 Poznań, Poland. (kaczmar@amu.edu.pl)
Natalia Jakubowska
Affiliation:
Department of Water Protection, Faculty of Biology, Adam Mickiewicz University in Poznań, Umultowska 89, 61–614 Poznań, Poland.
Sofia Celewicz-Gołdyn
Affiliation:
Department of Botany, Poznań University of Life Sciences, Wojska Polskiego 71c, 60–625 Poznań, Poland
Krzysztof Zawierucha
Affiliation:
Department of Animal Taxonomy and Ecology, Adam Mickiewicz University in Poznań, Umultowska 89, 61–614 Poznań, Poland.
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Abstract

We provide a comprehensive list of microorganisms (algae, Archaea, bacteria,cyanobacteria, fungi, and Protista) inhabiting cryoconite holes on glaciersthroughout the world, giving an updated taxonomy accompanied by geographiccoordinates and localities. The list consists of 370 taxa reported fromcryoconite holes (mostly from Arctic and Antarctic regions and European Alps).However, most of the taxa were not identified to the species level. Until nowonly 39 identified species or subspecies of bacteria and Archaea, 11 fungi, 17cyanobacteria, 62 algae, and 13 Protista are known from cryoconite holes, whichare only about 38% of total number of taxa reported from these ephemeralenvironments. Almost 62% of the taxa were marked as cf.(confer) or were identified only to the genera or even tothe higher taxonomic units (such as families or orders). This wide and detailedreview assists other scientists to identify the gaps in our knowledge aboutcryobionts and indicates directions for further zoogeographical and taxonomicalstudies in this unique freshwater habitat.

Information

Type
Research Article
Copyright
Copyright © Cambridge University Press 2015 
Figure 0

Fig. 1. Typical cryoconite holes in the ablation zone of the glacier.

Figure 1

Table 1. The number of results using the key words connected with different groups of microorganisms and cryoconite holes, cryoconite and glacier. A comparison of results from three different scientific browsers (Scopus, Web of Science (WoS) and Google Scholar (GS)). Accessed 15 December 2014).

Figure 2

Table. 2. Archaea, bacteria and viruses taxa (in alphabetic order) reported from cryoconite holes.

Figure 3

Table. 3. Fungi taxa (in alphabetic order) reported from cryoconite holes.

Figure 4

Table. 4. Cyanobacteria taxa (in alphabetic order) reported from cryoconite holes.

Figure 5

Table. 5. Algae taxa (in alphabetic order) reported from cryoconite holes.

Figure 6

Table. 6. Protista taxa (in alphabetic order) reported from cryoconite holes.

Figure 7

Figs. 2–5. Bacteria and Fungi. 2: Janthinobacterium lividum; 3: Rhodococcus sp.; 4: Pseudomonas fluorescens; 5: conidia of Cladosporium sp. (Sources. 2: ‘Janthinobacterium lividum on TY’ by Ninjatacoshell - Own work. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Janthinobacterium_lividum_on_TY.png#/media/File:Janthinobacterium_lividum_on_TY.png; 3: ‘Rhodococcus species’ by David Berd - This comes from the Centers for Disease Control and Prevention's Public Health Image Library (PHIL), with identification number #2981. Licensed under Public Domain via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Rhodococcus_species.jpg#/media/File:Rhodococcus_species.jpg; 4: ‘Pseudomonas fluorescens’ by Riraq25 - Own work. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Pseudomonas_fluorescens.jpg#/media/File:Pseudomonas_fluorescens.jpg; 5: ‘Cladosporium sp conidia’. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Cladosporium_sp_conidia.jpg#/media/File:Cladosporium_sp_conidia.jpg)

Figure 8

Figs. 6–9. Cyanobacteria and Fungi. 6: Lyngbya sp.; 7: Nostoc sp.; 8: Penicillium; 9: Yeasts (non-filamentous). (Sources. 6: ‘Lyngbya’ by NASA - http://microbes.arc.nasa.gov/images/content/gallery/lightms/publication/lyngbya.jpg. Licensed under Public Domain via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Lyngbya.jpg#/media/File:Lyngbya.jpg; 7: ‘Nostoc’ by Original uploader was Gibon at cs.wikipedia - Transferred from cs.wikipedia; transfer was stated to be made by User: Vojtech.dostal. Licensed under Copyrighted free use via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Nostoc.jpg#/media/File:Nostoc.jpg; 8: ‘Penicillium’ by Y_tambe - Y_tambe's file. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Penicillium.jpg#/media/File:Penicillium.jpg; 9: ‘Levure’ by Savant-fou - Own work. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Levure.jpg#/media/File:Levure.jpg)

Figure 9

Figs. 10–13. Algae. 10: Dinobryon sp.; 11: Gomphonema acuminatum; 12: Chlorella vulgaris; 13: Actinotaenium cucurbita. (Sources. 10: ‘Dinobryon sp’ by ja:User:NEON / commons:User:NEON_ja - Own work. Licensed under CC BY-SA 2.5 (http://creativecommons.org/licenses/by-sa/2.5/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Dinobryon_sp.jpg#/media/File:Dinobryon_sp.jpg; 11: ‘Gomphonema acuminatum’ by Philipp Gilbert (Muc) - Own work. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Gomphonema_acuminatum.jpg#/media/File:Gomphonema_acuminatum.jpg; 12: ‘Chlorella vulgaris NIES2170’ by ja:User:NEON / User:NEON_ja – Own work. Licensed under CC BY-SA 3.0 (http://creativecommons.org/licenses/by-sa/3.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Chlorella_vulgaris_NIES2170.jpg#/media/File:Chlorella_vulgaris_NIES2170.jpg; 13: ‘Actinotaenium cucurbita (BREB.)’ by Oliver s. - Own work (Original text: eigene Arbeit). Licensed under Public Domain via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Actinotaenium_cucurbita_(BREB.).jpg#/media/File:Actinotaenium_cucurbita_(BREB.).jpg)

Figure 10

Figs. 14–17. Cyanobacteria and Protista. 14: Oscillatoria sp.; 15: Halteria grandinella; 16: Vorticella campanula; 17: Holosticha pullaster. (Sources. 14: ‘Oscillatoria sp’ by ja:User:NEON / User:NEON_ja - Own work. Licensed under CC BY-SA 2.5 (http://creativecommons.org/licenses/by-sa/2.5/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Oscillatoria_sp.jpg#/media/File:Oscillatoria_sp.jpg; 15: ‘Halteria grandinella - 160x (14069352174)’ by Picturepest - Halteria grandinella - 160x. Licensed under CC BY 2.0 (http://creativecommons.org/licenses/by/2.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Halteria_grandinella_-_160x_(14069352174).jpg#/media/File:Halteria_grandinella_-_160x_(14069352174).jpg; 16: ‘Vorticella campanula’ by Giuseppe Vago - http://www.flickr.com/photos/giuseppevago/4938691032/. Licensed under CC BY 2.0 (http://creativecommons.org/licenses/by/2.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Vorticella_campanula.jpg#/media/File:Vorticella_campanula.jpg; 17: ‘Holosticha pullaster und Zysten - 160x (13215619384)’ by Picturepest - Holosticha pullaster und Zysten - 160x. Licensed under CC BY 2.0 (http://creativecommons.org/licenses/by/2.0/) via Wikimedia Commons - https://commons.wikimedia.org/wiki/File:Holosticha_pullaster_und_Zysten__160x_(13215619384).jpg#/media/File:Holosticha_pullaster_und_Zysten_-_160x_(13215619384).jpg)