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Spatial modelling of soil organic carbon stocks with combined principal component analysis and geographically weighted regression

Published online by Cambridge University Press:  18 October 2018

Long Guo
Affiliation:
College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
Mei Luo
Affiliation:
College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
Chengsi Zhangyang
Affiliation:
College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
Chen Zeng
Affiliation:
College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
Shanqin Wang
Affiliation:
College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
Haitao Zhang*
Affiliation:
College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
*
Author for correspondence: Haitao Zhang, E-mail: hzau_zht@163.com
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Abstract

With the development of remote sensing and geostatistical technology, complex environmental variables are increasingly easily quantified and applied in modelling soil organic carbon (SOC). However, this emphasizes data redundancy and multicollinearity problems adding to the difficulty in selecting dominant influential auxiliary variables and uncertainty in estimating SOC stocks. The current paper considers the spatial characteristics of SOC density (SOCD) to construct prediction models of SOCD on the basis of reducing the data dimensionality and complexity using the principal component analysis (PCA) method. A total of 260 topsoil samples were collected from Chahe town, China. Eight environmental variables (elevation, aspect, slope, normalized difference vegetation index, normalized difference moisture index, nearest distance to construction area and road, and land use degree comprehensive index) were pre-analysed by PCA and then extracted as the main principal component variables to construct prediction models. Two geostatistical approaches (ordinary kriging and ordinary co-kriging) and two regression approaches (ordinary least squares and geographically weighted regression (GWR)) were used to estimate SOCD. Results showed that PCA played an important role in reducing the redundancy and multicollinearity of the auxiliary variables and GWR achieved the highest prediction accuracy in these four models. GWR considered not only the spatial characteristics of SOCD but also the related valuable information of the auxiliary attributes. In summary, PCA-GWR is a promising spatial method used here to predict SOC stocks.

Information

Type
Crops and Soils Research Paper
Copyright
Copyright © Cambridge University Press 2018 
Figure 0

Fig. 1. Location of the study area in Chahe Town and the spatial distribution of samples for model calibration (n = 173) and validation (n = 87). Colour online.

Figure 1

Fig. 2. Descriptive statistics of measured soil organic carbon density and other environmental variables of the study area (n = 260). SOCD, soil organic carbon density; NDVI, normalized difference vegetation index; NDMI, normalized difference moisture index; TRD, recent distance to road; TRA, recent distance to city; CV, coefficient of variation; LDCI, land use degree comprehensive index.

Figure 2

Table 1. Eigenvalues and the eigenvectors of the correlation matrix in principal component analysis

Figure 3

Fig. 3. Spatial distribution of the principal component scores: (a) first principal component scores (26.697%), (b) second principal component scores (18.026%) and (c) third principal component scores (15.507%). Colour online.

Figure 4

Table 2. Diagnostic parameters of the geostatistical and regression models

Figure 5

Fig. 4. Root mean square error (RMSE) v. mean absolute estimation error (MAEE) plots for the four models and their Pearson's r values, namely, ordinary kriging (OK), ordinary co-kriging (OCK), ordinary least squares (OLS) and geographically weighted regression (GWR). Colour online.

Figure 6

Fig. 5. Spatial distribution of soil organic carbon density (SOCD) by ordinary kriging (OK), ordinary co-kriging (OCK), ordinary least squares (OLS) and geographically weighted regression (GWR). Colour online.

Figure 7

Fig. 6. Spatial distribution of the coefficients of different auxiliary variables in the geographically weighted regression (GWR) model. Colour online.

Figure 8

Table 3. Principal component variables in the ordinary least squared (OLS) model