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Explainer: Stochastic extinction

Published online by Cambridge University Press:  15 October 2026

Raymond L. Tremblay*
Affiliation:
Biology, University of Puerto Rico , Puerto Rico
*
Corresponding author: Raymond L. Tremblay; Email: raymond.tremblay@upr.edu
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Abstract

Content of image described in text.

Stochastic extinction is extinction caused by chance fluctuations (in births and deaths, in gene frequencies, and in the environment, including its rare extremes) rather than by a deterministic decline to zero. The phrase is an umbrella over two classes of randomness: environmental fluctuation, which is external to the population and whose rare extremes (“catastrophes”) are the tail of that same distribution rather than a separate class; and demographic accidents, which are internal and unavoidable in finite numbers, comprising the vagaries of birth and death, and the loss of genetic variability. It also covers a separate palaeontological usage in which “stochastic” instead means extinction non-selective with respect to traits. Most productively it is a population-level idea: even a population with, on average, a positive or stable growth rate can be lost to chance once it becomes small, so that stochastic extinction is best read as a probability: the chance, over a stated horizon, that a self-replacing population completing its full life cycle in the wild is no longer attainable. Whether a given decline is labelled “stochastic” or “deterministic” frequently depends on the scale and time horizon of observation rather than on the biology itself. The term therefore requires four things to be stated: the source of randomness, the biological scale (individual, population, metapopulation or clade), the time horizon and whether the claim concerns an underlying process or an observed pattern.

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Perspective
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© The Author(s), 2026. Published by Cambridge University Press
Figure 0

Figure 1. Stochastic extinction as a chance-driven loss of viability. Simulated trajectories of a small population with, on average, a stable growth rate. Both panels use the same random shocks, so the difference between them is the biology, not the noise. (A) With chance alone the trajectories wander; numbers can sit low for a long time and still recover, and the expected path of a population that has entered the shaded region (heavy dashed line) returns. (B) When growth itself weakens as numbers fall, because mate-finding failure, sex-ratio failure and lost genetic variability reinforce one another, that expected path steepens instead: the extinction vortex. Neither panel contains a line that gets crossed. The shading marks a risk that deepens as numbers fall, at a rate neither constant nor predictable across densities. The vertical axis is qualitative (few to many).Figure 1. long description.

Figure 1

Figure 2. One term, several meanings. The two population-level classes of randomness (environmental fluctuation, external to the population, and demographic accidents, internal to it) act on the process of population change and together set the chance that a self-replacing population is no longer attainable. The palaeontological usage, extinction non-selective with respect to traits (Raup’s “field of bullets”), describes an observed pattern and can be produced even by a deterministic cause. Clarity requires saying which meaning, at which scale, over which horizon, is intended.Figure 2. long description.

Figure 2

Figure 3. Stochastic extinction as failure to complete the life cycle. A taxon-neutral, stage-structured life cycle (read each stage for your organism: seed, spore, egg, larva, or planula). (A) When every transition needed to close the cycle is intact, the population self-replaces. (B) When recruitment collapses (establishment falls to near zero because mates, pollinators, or symbiotic partners are lost), adults persist and still produce propagules, but the cycle cannot close and the population can no longer self-replace. Crucially, the presence of all life-cycle stages does not guarantee viability: a population can contain every stage, adults included, yet still be unable to replace itself. Stochastic extinction, in this view, is the chance-driven weakening of any transition needed to close the cycle, and the limiting process can act at any stage or transition. Establishment is only the example shown here; survival, maturation, or fecundity can equally be the failing step. Read each stage for your organism: a propagule is a seed (plants), spore (fungi), egg or larva (animals and fish), or planula (corals); propagule dormancy/stasis applies chiefly to seed and spore banks, and many propagules (eggs, larvae, planulae) lack a persistent stage.Figure 3. long description.

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Author comment: Explainer: Stochastic extinction — R0/PR1

Comments

Dear Dr Roberts,

Please find enclosed my invited contribution to the Explainer mini-series in Cambridge Prisms: Extinction, “Explainer: Stochastic extinction,” submitted as a Perspective. I am grateful to Jessica Jones for the invitation of 14 May 2026, and to you and the Editors-in-Chief, Professor Brook and Associate Professor Alroy, for the opportunity to contribute to this series and its accompanying reference glossary.

The Explainer treats “stochastic extinction” as what it has become in practice: an umbrella term rather than a single concept. It distinguishes the four population-level sources of randomness — demographic, environmental, genetic, and catastrophic — from the separate palaeontological usage, in which “stochastic” means extinction non-selective with respect to traits, and it stresses the distinction between process and pattern that these usages so often conflate. Its central, practical reading is that stochastic extinction is best understood at the population level as the chance-driven crossing of a viability threshold: even a population with, on average, a stable or positive growth rate can be lost to chance once it becomes small. The piece closes with the four coordinates — source, scale, time horizon, and process versus pattern — that make the term precise. The manuscript is original, is not under consideration elsewhere, and its claims have been checked against the primary literature. I have no competing interests to declare, and the article processing fee is waived under the terms of the invitation.

I would be glad to make any revisions the editors feel would strengthen the piece, and I thank you for your consideration.

Yours sincerely,

Raymond Tremblay

Department of Biology, University of Puerto Rico, San Juan, Puerto Rico

raymond.tremblay@gmail.com

Review: Explainer: Stochastic extinction — R0/PR2

Conflict of interest statement

I have no competing interests

Comments

Explainer: stochastic extinction. (For Cambridge Prisms)

Writing an explainer of extinction processes for a likely audience of conservation practitioners is a very good idea. Bravo! That said, this effort has two sets of problems, one that will take modest effort to fix, the other will take rather more.

Conceptual problems.

The authors make a correct choice in recognising that human actions may cause inexorable declines to extinction in many species. We destroy their habitats, or we hunt them to extinction. Protecting species from these impacts has led to species recoveries.

2. The authors make a correct choice in recognising two kinds of stochastic effects. One is the nature of environments — broadly defined — external to the population under consideration. Extreme weather events are an obvious example. These can impact even large populations and often impact many species simultaneously.

3. The authors split these effects into two classes — separating out catastrophes from routine impacts. This is a mistake, and it begs the question of what constitutes a catastrophe.

One reason we’d like to know the difference is so that we can estimate a population’s “resilience” — meaning how fast a population can recover from a catastrophe. As the two examples in this paper show

Pimm S.L., Donohue I, Montoya J.M,. Loreau M. Measuring resilience is essential to understand it. Nature Sustainability. (2019) Oct;2(10):895-7.

this is far from simple. The authors should not separate two kinds of environmental stochasticity — especially putting them in separate classes as they do in lines 37 to 49.

Next, we come to demographic accidents. These are internal to the population, so peculiar to it, and are the unavoidable consequences of demography. As such, they form a class in themselves and one I would classify together, but with three subsets.

The vagaries of death: all or many of the individuals in a population dying in the same generation for independent reasons. If 20% of a population dies each generation, then a population of 1000 will be OK. But for a population of 10, and a Poisson lambda of survival of 0.8, there’s a chance that all the individuals will die each.

The vagaries of birth. Also unavoidable, with the chance that all those born in a generation will be of the same sex. This is a binomial process.

The loss of genetic variability and its consequences. The loss is well-understood — 1/Ne per generation where Ne is the effective population size. The consequences part is not well understood, in the sense that we don’t know how well a decline in genetic variability will translate into a reduction in adult life span or increased mortality of young, or decreased numbers of young or some combination of these.

Now, changing the authors’ groupings to the ones I suggested — which is a strong recommendation — is not going to take them much time. The problem is that once one recognises these, it becomes clear that the author’s Figure 1 is wrong. It suggests a threshold — a “cliff” over which a population falls. Rather, there is an area where there is a downhill slope that gets ever steeper, with the three demographic accidents creating a positive feedback spiral to extinction. (A “vortex”).

Practical problems.

I know these pieces have to be short, but I think the authors must be allowed a few words and — especially! — a few references to the practical consequences of all this.

All populations show the “more time means more variation” pattern. The longer we study a population, the more variable it becomes — not just measured by its extremes, but by its variance. (Pimm, S. L. & Redfearn, A. Nature 334, 613–614 (1988); Inchausti, P. & Halley, J. Science 293, 655–657 (2001).)

So deciding between a population that is showing a long-term decline from human impacts and one that is showing a mid-term decline, likely to be reversed, as part of its natural changes is not an easy one. The implications for conservation are profound. Generally, one needs external information about those human impacts, to identify them and stop them.

In the example of the Illinois prairie chicken, those who managed it tried many interventions before they finally accepted the population was inbred and they needed a genetic rescue.

Second, because of the fractal nature of the “more time means more variation” pattern, it can be hard to identify “catastrophes” as a separate class of environmental variation.

Deciding between the vagaries of birth and death and the loss of genetic variation and its consequences is difficult. (As explained, one can model the first two, but not the second.) So I had argued that a genetic rescue of the Florida panther was pointless: those vagaries plus the increasing loss of habitat would doom it. In the fullness of time, the National Park Service asked me to review the genetic rescue, and I retracted that opinion. Pimm SL, Dollar L, Bass Jr OL. The genetic rescue of the Florida panther. Animal Conservation. 2006 May;9(2):115-22. (The genetic effects had a major impact on the survival of the kittens, but not the adult demographics.)

Finally, because one cannot easily model the consequences of small populations on lost fecundity, one may model just the demographic issues. One can notice that these paint too rosy a picture, and demographc interventions may still be essential. Kong, L., Xu, W., Xiao, Y., Pimm, S.L., Shi, H. and Ouyang, Z., 2021. Spatial models of giant pandas under current and future conditions reveal extinction risks. Nature Ecology & Evolution, pp.1-8.

The authors may well have other case histories to discuss — and that’s fine. But, they must connect these theoretical musing with the practice, but to clarify their theories and to make the piece useful

Review: Explainer: Stochastic extinction — R0/PR3

Conflict of interest statement

Reviewer declares none.

Comments

An excellent job of covering the definition of stochastic extinction.

- Line 39 – consider changing ‘shuffling of genes’ to ‘shuffling and loss of genes’

- All Figures – In this new world of stating when generative AI is used, I see no need to acknowledge its help with coding. We did not acknowledge Google or Stackoverflow for the same use.

- Fig 2 – text needs to be larger. Same for much of Fig 3.

- Line 40 – Is it when ‘self-replacing population is not longer attainable’, or when the probability of persistence for some amount of time is sufficiently low? This seems like a tricky thing to state clearly because it is a probability problem.

- Line 44 – Failing to find a mate is one mechanism that can cause an Allee effect, so I’m not sure why they are listed separately.

Recommendation: Explainer: Stochastic extinction — R0/PR4

Comments

Both reviewers have provided useful comments regarding the manuscript. Review 1 has provided some suggestions regard theoretical and practical issues around stochastic extinction that you may want to considered to help improve the precision of its use and illustrate its application. That said the idea of the ‘Explainer’ is to provide something short paper for those new to the field and/or outside of the field such as journalists and politicians. I would therefore prefer if the manuscript could be kept within the word limit as best you can and where necessary, and as you already have, make use of supplementary materials as my concern anything too long will reduce the audience for this important term.

Decision: Explainer: Stochastic extinction — R0/PR5

Comments

No accompanying comment.

Author comment: Explainer: Stochastic extinction — R1/PR6

Comments

Raymond L. Tremblay

Department of Biology, University of Puerto Rico

San Juan, Puerto Rico

raymond.tremblay@gmail.com

25 August 2026

Dr David Roberts

Handling Editor, Cambridge Prisms: Extinction

Dear Dr Roberts,

RE: EXT-2026-0042, “Explainer: Stochastic extinction” (revised)

Please find enclosed the revised version of the above manuscript, submitted in response to your decision of 20 August 2026. I am grateful to you and to both reviewers for reports that were generous with their time and unusually useful. I have addressed every comment; a point-by-point response accompanies this submission.

The substantive changes are these. The four sources of randomness have been regrouped into two classes, one external to the population and one internal to it, with the internal class carrying three named subsets, as Reviewer 1 recommended. Catastrophic stochasticity is no longer a class of its own, because a catastrophe has no scale-free definition and is better understood as the tail of the environmental distribution. Figure 1 has been rebuilt from scratch: the threshold line is gone, and two panels sharing a single matrix of random shocks now separate chance alone from chance with feedback, so that the extinction vortex appears as a steepening slope rather than a cliff. Threshold language has been recast as probability language throughout, which was Reviewer 2’s most valuable observation and which turned out to be Reviewer 1’s Figure 1 comment arriving from another direction. Mate-finding failure is now treated as one mechanism of the Allee effect rather than as a separate item. All five of the references Reviewer 1 suggested are cited, and each was read in the original. Figures 2 and 3 have been enlarged and redrawn as Reviewer 2 asked, and the Impact Statement and the five end-of-article statements have been added.

There is one point I would like to record, not as a reservation about the revision but as a statement of how I understand the task. Reviewer 1 argued emphatically that the concept should be reorganised, the two-class structure is cleaner, it is better grounded in current usage, and the article is stronger for it. I have adopted it in full and without hedging. But stochastic extinction has been in use since 1939, and it has accumulated more than one defensible reading along the way. The four-way partition this revision departs from was itself the standard for four decades, named by Shaffer in 1981 and formalised by Lande in 1993, and it too once looked obviously correct. What is accepted today may be read differently tomorrow, and I do not think an Explainer serves its readers by presenting the current consensus as though it had no history.

I have therefore kept that plurality in the Supplementary Material rather than allowing it to disappear from the record. Section S1 traces the genealogy of the concept from Feller’s birth-and-death processes to the present, and a new Table S1 sets out the full sequence, twenty-eight contributions from 1939 to 2023 across mathematics, epidemiology, ecology, conservation biology and palaeontology, including the palaeontological tradition that developed largely independently and in which the word carries two further senses. Section S2 states plainly which two divisions of the older four-way list have been collapsed and why, so that a reader can see exactly what was given up. Section S3 sets out the scale problem, since the same event is a deterministic driver at one level of description and a random shock at another. Section S4 records that the viability reading advanced in the article is a deliberate position rather than a settled definition, and that the last-individual convention remains the more conservative and more auditable one. The main text keeps the same tension visible in one short paragraph.

My hope is that a conservation biologist meeting this term for the first time in ten or twenty years will find in the Explainer both the reading now current and the record of how it was arrived at, and will be equipped to judge for themselves whether it still holds.

I should also report that the revision runs longer than the version submitted: body text plus figure captions is 1,448 words against 1,263, an increase of 14.6 per cent, notwithstanding your request that the article stay within the word limit. The response to reviewers explains where the words went and offers about 170 words of specific cuts if you would prefer the article at its former length. I would rather be told what to remove than remove the wrong thing.

Enclosed are the revised manuscript in clean and tracked-changes form, the revised Supplementary Material in both forms, the three figures as separate files at 300 dpi, and the point-by-point response to the reviewers.

The article is original, has not been published elsewhere, and is not under consideration by another journal. I am the sole author, and I have no competing interests to declare.

Thank you again for handling the manuscript, and for a review process that improved it in structure and not only in wording.

Yours sincerely,

Raymond L. Tremblay

Department of Biology, University of Puerto Rico, San Juan, Puerto Rico

Recommendation: Explainer: Stochastic extinction — R1/PR7

Comments

Having read the careful response to the reviews, manuscript and supplementary materials I am happy to recommend the manuscript be accepted. It is clear that you have taken the comments and board and strengthened the manuscript that I now look forward to seeing it published.

Decision: Explainer: Stochastic extinction — R1/PR8

Comments

No accompanying comment.