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Cloning, molecular characterization, and spatial and developmental expression analysis of GPR41 and GPR43 genes in New Zealand rabbits

Published online by Cambridge University Press:  28 February 2017

C. Y. Fu
Affiliation:
College of Animal Science and Technology, Shandong Agricultural University, Tai’an, Shandong 271018, China
L. Liu
Affiliation:
College of Animal Science and Technology, Shandong Agricultural University, Tai’an, Shandong 271018, China
Q. Gao
Affiliation:
College of Animal Science and Technology, Shandong Agricultural University, Tai’an, Shandong 271018, China
X. Y. Sui
Affiliation:
College of Animal Science and Technology, Shandong Agricultural University, Tai’an, Shandong 271018, China
F. C. Li*
Affiliation:
College of Animal Science and Technology, Shandong Agricultural University, Tai’an, Shandong 271018, China
*
† E-mail: chlf@sdau.edu.cn

Abstract

Short-chain fatty acids (SCFAs) play a regulatory role in various physiological processes in mammals and act as endogenous ligands for the G protein-coupled receptors (GPR) 41 and 43. The role of GPR41 and GPR43 in mediating SCFA signaling in the rabbit remains unclear. The present study was to investigate the sequence of the GPR41 and GPR43 messenger RNA (mRNA) and their expression pattern in different tissues and developmental stages in New Zealand rabbit. Comparison of genomic sequences in GenBank using the Basic Local Alignment Search Tool program suggested that the New Zealand rabbit GPR41 mRNA has high similarities with the human (84%), bovine (84%) and Capra hircus (84%) genes. Similarly, GPR43 mRNA has high similarity with the rat (84%) and mouse (84%) genes. Real-time PCR results indicated that GPR41 and GPR43 mRNA were expressed throughout rabbit’s whole development and were expressed in several tissues. G protein-coupled receptor 41 and GPR43 mRNA were most highly expressed in pancreas (P<0.05) and s.c. adipose tissue (P<0.05), respectively. The expression levels of GPR41 mRNA was down-regulated in duodenum, cecum (P<0.05) and pancreas and up-regulated in jejunum, ileum, adipose tissue and spleen during growth. G protein-coupled receptor 43GPR43 mRNA was highly expressed in the duodenum, jejunum, ileum, colon, cecum and lung at 15th day (P<0.05), whereas the expression levels in the pancreas and spleen increased later after birth, with the highest expression at 60th day (P<0.05).

Information

Type
Research Article
Copyright
© The Animal Consortium 2017 
Figure 0

Figure 1 Alignments of rabbit G protein-coupled receptor 41 (GPR41)/G protein-coupled receptor 43 (GPR43) and rat GPR41/GPR43 amino acid sequences (a) (The rabbit GPR41 and GPR43 amino acid sequences are deduced from their messenger RNA (mRNA) sequences in this study. The GenBank accession numbers for the rat GPR41 and GPR43 amino acid sequences are NP_001102382.1 and NP_001005877.1. The identical amino acid residues between the rat and rabbit sequences are shaded). Phylogenetic analysis of mRNA sequence (b) and amino acid sequences (c) of rabbit GPR41/GPR43 from Homo sapiens, Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus and Capra hircus. The phylogenetic analysis was conducted in Molecular Evolutionary Genetics Analysis 4.0. The three-dimensional structures of rabbit GPR41/43 amino acid sequences (d). This diagram was generated by SWISS-MODEL online software (https://swissmodel.expasy.org/). The α-helix residues are colored with red, and loop and unassigned residues with other colors.

Figure 1

Figure 2 The messenger RNA (mRNA) levels of rabbit G protein-coupled receptor 41 (GPR41) (a) and G protein-coupled receptor 43 (GPR43) (b) in different tissues. Values are shown as the mean±SEM (n=8). a,b,cSignificantly different mean value (P<0.05).

Figure 2

Figure 3 The rabbit G protein-coupled receptor 41 (GPR41) messenger RNA (mRNA) levels in the duodenum (a), jejunum (b), cecum (c), colon (d), ileum (e), thymus (f), lung (g), adipose tissue (h), spleen (i) and pancreas (j) at different developmental stages (15, 30, 60 and 90 days). The values are shown as the mean±SEM (n=8). a,b,cSignificantly different mean value (P<0.05).

Figure 3

Figure 4 The rabbit G protein-coupled receptor 43 (GPR43) messenger RNA (mRNA) levels in the duodenum (a), jejunum (b), cecum (c), colon (d), ileum (e), thymus (f), lung (g), adipose tissue (h), spleen (i) and pancreas (j) at different developmental stages (15, 30, 60 and 90 days). The values are shown as the mean±SEM (n=8). a,b,cSignificantly different mean value (P<0.05).

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