1. Introduction
The demand for precise cell sorting and enrichment has attracted significant attention due to vital applications such as early cancer detection, treatment and cell-based therapies (Saez-Ibañez et al. Reference Saez-Ibañez, Upadhaya, Partridge, Shah, Correa and Campbell2022; Luo et al. Reference Lu, Liu, Hu and Xuan2024). Microfluidic chips have emerged as powerful tools for studying various aspects of cell behaviour in fluid flow (Amini, Lee & Di Carlo Reference Amini, Lee and Di Carlo2014; Bayareh Reference Bayareh2020). Their miniaturised and controlled environments allow for precise manipulation and observation of cells, making them invaluable in studying cell migration, separation and deformation. Microflow in an inertial regime benefits high-throughput and label-free particle sorting. However, current microfluidic devices primarily rely on size differences for cell separation (Xu & Yin Reference Xu2021). The limited difference in size between normal cells and corresponding lesion cells underscores the need for a system that can separate cells based on other distinctions. Diseases such as cancer (Molter et al. Reference Molter, Muszynski, Tao and Trivedi2022), blood disorders (Debaize et al. Reference Debaize2022) and inflammation (Kiseleva et al. Reference Kiseleva, Kolmogorov, Cherednichenko, Khovantseva, Bogatyreva, Markina, Gorelkin, Erofeev and Markin2024) are associated with changes in cell deformability, which are crucial in biological research and can be regarded as valuable indicators of alterations in cellular phenotype. Specifically, individual cancer cells exhibit significantly reduced stiffness compared with normal tissue from the same origin (Daniel et al. Reference Daniel, Traub, Sachsenmaier, Riester, Mederake, Konrads and Danalache2023). A decrease in single-cell stiffness is often correlated with an increase in invasiveness or metastatic potential (Hakim et al. Reference Hakim, Khorasheh, Alemzadeh and Vossoughi2021; Molter et al. Reference Molter, Muszynski, Tao, Trivedi, Clouvel and Ehrlicher2022). Therefore, the development of a high-throughput inertial microfluidic system that can segregate and concentrate samples based on particle deformation is highly desired, which, however, requires sufficient knowledge about the dependence of soft particle sorting on particle deformability and flow conditions.
Considerable efforts have been made to investigate the dynamics and inertial focusing of microparticles in microfluidic flow (Sugihara-Seki Reference Sugihara-Seki1993; Asmolov Reference Asmolov1999; Matas, Morris & Guazzelli Reference Matas, Morris and Guazzelli2009; Alghalib et al. Reference Alghalib, Rosti and Brandt2019; Ghosh & Goswami Reference Ghosh and Goswami2022). However, most attention has been paid to the migration of rigid particles under different Reynolds numbers (
$Re$
), with a special emphasis on the effects of particle size (Di Carlo Reference Di Carlo2009; Chrit, Bowie & Alexeev Reference Chrit, Bowie and Alexeev2020) and shape (Masaeli et al. Reference Masaeli, Sollier, Amini, Mao, Camacho, Doshi, Mitragotri, Alexeev and Di Carlo2012; Hu et al. Reference Hu, Lin, Guo and Ku2021; Lauricella et al. Reference Lauricella, Zhou, Luan, Papautsky and Peng2022). Larger particles tend to be focused closer to the centre of the channel, enabling size-based inertial particle separation (Di Carlo Reference Di Carlo2009). The inertial focusing of non-spherical particles is shown to be dominated by the largest dimension or the rotation diameter, leading to the possibility of shape-based particle sorting (Hur et al. Reference Hur, Henderson-MacLennan, McCabe and Di Carlo2011). Recent research has focused on understanding how deformability affects the dynamics and inertial focusing of soft particles under confined flow, with important implications for efficient cell segregation using microfluidics (Li et al. Reference Li, Yang, Villareal, Griffin and Pappas2022; Sun et al. Reference Sun, Ma, Lu, Cai, Han, Wang and Yang2023). The elastic deformation of soft particles alters the balance of inertial forces and induces lateral migration towards the channel centre (Hu et al. Reference Hu, Lin, Guo and Ku2021; Li et al. Reference Li, Yang, Villareal, Griffin and Pappas2022). Systematic numerical simulations based on direct numerical simulation (Chun & Ladd Reference Chun and Ladd2006) and the lattice Boltzmann method (Zhao, Cheng & Yu Reference Zhao, Cheng and Yu2012) have provided valuable insights into the complex dependence of particle deformation and dynamics in microfluidic flow on Reynolds numbers and particle deformability (Kruger, Kaoui & Harting Reference Krüger, Kaoui and Harting2014). Although experimental attempts have been made to capture the deformation and focusing position of soft particles (e.g. viscous oil droplets (Choi, Kim & Lee Reference Choi, Kim and Lee2020) and cells (Connolly, McGourty & Newport Reference Connolly, McGourty and Newport2021) in microfluidic channels, due to the limited susceptibility of those particles to shear-induced breakage, a systematic investigation of the focusing dependence on Reynolds number and particle stiffness, as well as sufficiently resolved particle deformation measurements, is still absent. This is the scope of the current work.
In this work, we employ hydrogel microparticles with similar sizes but varied stiffness and use a high-speed camera to investigate and quantify the deformation, orientation and equilibrium focusing position of these soft particles in microfluidic flow under different Reynolds numbers. The hydrogel microparticles are generated by microfluidic emulsions (Thorsen et al. Reference Thorsen, Roberts, Arnold and Quake2001), and their size and stiffness are precisely controllable through regulating the flow velocity and material components. Hydrogel microparticles have been widely used in drug delivery (Zhang & Wu Reference Zhang and Wu2023), cell delivery (He et al. Reference He2021), controlled drug release (Yu et al. Reference Yu, Wang, Zhang and Liu2023), scaffold building (Kumar & Misra Reference Kumar and Misra2020) and biofabrication (Smith & Moxon Reference Smith and Moxon2021). The generation of hydrogel microparticles with similar size and deformability to cancer cells presents an excellent opportunity to closely investigate the migration and deformation behaviour of cells under varied flow conditions. We further present the first controlled and detailed quantification of the equilibrium morphology and position of soft particles with different elastic modulus in microflows of varied Reynolds numbers. We demonstrate a linear correlation of the particle deformation and tilt angle with the capillary number and discover a linear scaling of the equilibrium position with the Reynolds number and the major axis of the deformed particles. The findings here can serve as a blueprint for the design of inertial microfluidic chips, thereby broadening their applicability and enhancing precision in diverse operational scenarios such as drug delivery and cancer treatment.
2. Experimental methods and theoretical analysis
2.1. Hydrogel microparticles
Polyethylene glycol (PEG) and alginate (ALG) hydrogel microparticles were generated using microfluidic emulsions. Various concentrations of diacrylated PEG solution (ranging from
$8\,\%$
to
$16\,\%$
) with
$0.1\,\%$
photoinitiator (LAP, Sigma-Aldrich) were injected into a microfluidic chip, as shown in figure S2. The diameter of the hydrogel microparticles was controlled to be approximately 30 μm. After crosslinking, the particles were centrifuged at 500 RPM for 5 minutes to remove the oil phase. To minimise the size difference among the PEG hydrogel microparticles, they were centrifuged at 300 RPM for an additional 5 minutes. After centrifugation, the supernatant was carefully removed, and the pellet containing the particles was collected. This process helps to concentrate the particles and reduce remaining size discrepancies among them.
Hydrogel strips with PEG concentrations identical to those of the particles were fabricated to determine their modulus. Initially, rectangular PEG hydrogels measuring 38 mm
$\times$
12 mm were prepared. These were subsequently shaped into dumbbells for tensile testing. The ends of each sample were affixed to acrylic sheet grippers using an adhesion promoter. Samples, with effective dimensions of 30 mm
$\times$
8 mm
$\times$
2 mm, were loaded into a CMT6104 universal testing machine (NSS) at a displacement rate of 20 mm min−1. Stress–strain data obtained from the tests were imported into MatEditor 2023 software. The neo-Hookean model for hyperelastic materials was employed within the software to determine the initial shear modulus of the hydrogels. The neo-Hookean model can be written as (Rivlin Reference Rivlin1948)
where
$W$
is the strain energy density function,
$I$
is the first invariant of the Cauchy–Green deformation tensor,
$J=1$
for incompressible materials,
$G$
is the shear modulus determined from experiments and D is a material constant. The results of shear modulus fitted by the neo-Hookean model are shown in figure S3 and used in the calculation of capillary number
$Ca_e$
.
2.2. Optical observation system
We built a measurement system to enable the real-time, in situ observation of particles as they moved through the channel (figure S4). The system was assembled on a microscope platform, with samples held in syringes and injected into the channel via Tygon tubes using a syringe pump. The top camera of the microscope system can be swapped out with a high-speed camera using an F-mount adapter. This set-up allows for the capture of clear, detailed images of each particle as it migrates through the microchannel. Subsequently, these images were stored on a hard drive for further analysis. During the experiment, the datasets of one test are all from the same batch and the error bars shown in the figures are from several tests (
$\gt$
3 tests, 10 ml of suspended particles with concentration of 5000 ml−1 was injected into the channel per time).
2.3. Theory for particle deformation and orientation
We present a theoretical framework describing the coupled dynamics of particle deformation, orientation and spatial equilibrium in flow. The analysis focuses on dilute suspensions of deformable particles with characteristic dimension suspended in Newtonian fluids under uniform macroscopic strain. The dilute assumption permits the reduction of the many-body problem to that of an isolated particle subjected to an undisturbed uniform shear rate
$\dot {\gamma }$
.
For a dilute suspension of elastic particles in a Newtonian fluid under simple shear flow, Roscoe (Reference Roscoe1967) developed a linear theory applicable under conditions of small deformation. Roscoe determined that the particle deformation is proportional to the capillary number. Clausen & Aidun (Reference Clausen and Aidun2020) adopted a similar concept, treating the moduli of different shear modulus
$G$
as the particle rigidity. For a small particle moving along a channel with a small ratio between particle diameter and channel width, Lashgari et al. (Reference Lashgari, Picano, Breugem and Brandt2014) approximated this flow condition to the simple shear flow by using an average shear rate
$\dot {\gamma }=2U_m/W$
, where
$U_m$
is the maximum velocity at the centre of the channel and
$W$
is the channel width. This approximation allows the shear near the wall to be treated as a simple shear flow when the ratio between particles and channel width is small (
$\lt$
0.2). The capillary number defined as
$Ca_e=\eta \dot {\gamma }/G$
, Taylor parameter
$D_T=(a-b)/(a+b)$
, where
$\eta$
is the fluid viscosity,
$G$
is the shear modulus of the material and
$a$
and
$b$
are the major and minor axes of the particle after deformation. When the elastic capillary number
$Ca_e\leqslant 0.2$
, substituting
$Ca_e$
and
$D_T$
to the equations from Roscoe’s model, we can have a linear relation (Gao, Hu & Castañeda Reference Gao, Hu and Castañeda2013; Villone & Maffettone Reference Villone and Maffettone2019):
where
$k_1$
and
$k_2$
are factors fitted by our experimental data.
2.4. Force analysis
The dynamics of neutrally buoyant spherical particles in rectangular microchannel flows is governed by two competing inertial lift components: the wall-induced lift and the shear-gradient-induced lift (Martel & Toner Reference Martel and Toner2014). The wall-induced inertial lift force is given by
and the shear-gradient-induced lift can be expressed as
where
$\rho$
is the fluid density,
$U_m$
is the maximum fluid velocity, a is the particle radius, H is the channel height and
$\dot {\gamma }$
is the shear rate (Williams, Lee & Giddings Reference Williams, Lee and Giddings1994; Kurose & Komori Reference Kurose and Komori1999; Di Carlo Reference Di Carlo2009; Zhou & Papautsky Reference Zhou and Papautsky2013). The total inertial lift force is characterised by
where
$f_L$
is the lift coefficient dependent on channel Reynolds number
$Re$
and normalised particle position
$x_p/W$
(Asmolov Reference Asmolov1999; Di Carlo et al. Reference Di Carlo, Edd, Humphry, Stone and Toner2007). The wall-induced lift pushes particles away from channel walls due to pressure increases in the particle–wall gap, while the shear-gradient-induced lift directs particles towards regions of high shear rate at the channel face centres, resulting from velocity profile curvature (Matas, Morris & Guazzelli Reference Matas, Morris and Guazzelli2004). The equilibrium particle position is determined where these competing forces balance:
The ratio of wall-induced lift force (
$F_W$
) to shear-induced lift force (
$F_S$
) yields an equilibrium position that scales linearly with particle diameter (
$a_0$
). Based on this relation, for deformable elliptical particles suspended in microfluidic flows, the equilibrium configuration exhibits pronounced sensitivity to particle geometry. Specifically, the equilibrium position (
$x_{eq}$
) demonstrates a linear scaling with the particle long axis (
$a$
), so that
$x_{eq}\propto \alpha \times AR$
, where
$AR= a/W$
and
$\alpha$
is a flow-dependent coefficient (Hur et al. Reference Hur, Henderson-MacLennan, McCabe and Di Carlo2011). This relationship has been further refined to account for viscoelastic effects, yielding
where
$C_1$
and
$C_2$
are empirical constants and
$D_e$
is the Deborah number, characterising the ratio of fluid relaxation time to flow time scale (Yang et al. Reference Yang, Kim, Lee and Lee2016). The orientation of the long axis relative to the flow direction significantly influences the focusing dynamics, particularly in viscoelastic fluids where normal stress differences enhance the shape-dependent migration (Li et al. Reference Li, Lu, Xuan and Hu2016; Lu et al. Reference Lu, Liu, Hu and Xuan2017). The linear correlation between
$x_{eq}$
and
$a$
was experimentally validated across a range of flow and particle conditions. Through systematic investigation, we determined the coefficients governing this relationship and derived a novel analytical expression for equilibrium position prediction.
Schematic and experimental observation of deformation-based microparticle and cell focusing in microfluidic channels. (a) Schematic of the inertial microfluidic chip made of polydimethylsiloxane (PDMS) with a dispersion pool adjacent to the inlet to ensure uniform flow prior to entering the focusing section for observation. (b) Schematic of two microparticles with identical sizes but varying deformability, focusing at distinct equilibrium positions as a result of deformation-modulated lift forces. Here,
$F_S$
and
$F_W$
represent shear- and wall-induced lift forces, respectively. (c) Optical images of similarly sized PMMA (upper) and ALG (lower) microparticles labelled with TX-red and FITC fluorescent dyes, respectively. (d–f) The experimental observation of different view positions of the channel. Focusing observed at 2 mm from the inlet, and a clear separation started at 15 mm from the inlet. The white bars mark a scale of 50 μm. (g) The focusing and separation positions of PMMA–ALG mixture at Re = 100, 140, 180, 220. Scale bar: 100 μm.

3. Results
The inertial focusing microfluidic device is schematically shown in figure 1(a) (see the detailed fabrication procedure in figure S1). The microfluidic channel has a rectangular cross-section, hosting particles of average sizes of diameter
$a_0$
= 30 μm. Figure1(b) depicts the migration and focusing of soft particles with distinct deformability in microfluidic flow. Lateral migration of microparticles is driven by the total inertial forces exerted on the particles, and the equilibrium focusing position is reached as the total lift force (
$F_L$
) becomes 0 (Jannesari Ghomsheh, Jafari & Funfschilling Reference Jannesari Ghomsheh, Jafari and Funfschilling2023). These forces stem from two main sources (Loth & Dorgan Reference Loth and Dorgan2009): first, the transverse background shear within the fluid (known as shear-induced lift,
$F_S$
); second, the interaction between a particle and the channel wall (referred to as wall-induced lift,
$F_W$
). The final equilibrium focusing position is reached when
$F_S=F_W$
(figure 1
b). Different particle deformability is expected to alter the focusing positions (Doddi & Bagchi Reference Doddi and Bagchi2008).
Hydrogel microparticles with diameter of around 30 μm were generated by microfluidic emulsions (figure S2) and diluted to 0.1 % (w/v) before being introduced to the microchannels to minimise interparticle interactions. Water solution containing 0.01 % Span 80 surfactant was used to mitigate particle aggregation. A high-speed camera was used to observe and measure the particle positions
$x_{eq}$
under different flow Reynolds number (
$Re$
) (see detailed experimental set-up in figure S4). Here,
$Re$
is defined as
$Re=\rho _f U_m D_W/\mu$
, where
$\rho_{f}$
is the fluid density,
$\mu$
is the dynamic viscosity of the fluid,
$U_m$
is the maximum flow velocity and
$D_W=2WH/(W+H)$
is the hydraulic diameter with
$W$
and
$H$
being the width and height of the channel, respectively. We define the dimensionless equilibrium position
$X_{eq}=2x_{eq}/W$
.
For a pilot study, microparticles with the same average diameter of around
$a_0$
= 30 μm, made from poly(methyl methacrylate) (PMMA) and 2 % alginate (ALG) hydrogel, were used (figure S5). The PMMA and ALG hydrogel particles have substantially different stiffness, with Young’s modulus of
$E$
= 3 GPa (Weihs, Lee & Kramer Reference Weihs, Lee and Kramer1994) and
$E$
= 40 kPa (Lee & Mooney Reference Lee and Mooney2012), respectively. To clearly observe their equilibrium positions, the PMMA beads were pre-stained with TX-red dye and ALG particles were stained with FITC fluorescent dye (figure 1
c), which were observed using a fluorescent microscope. From figure 1(d–f), the focusing and separation processes of the beads can be clearly observed. Based on the work of Di Carlo (Reference Di Carlo2009), the channel used in this work was designed to be sufficiently long to allow the equilibrium position to be reached even under the highest flow rates. Figure 1(g) illustrates the variation in focusing and separation locations under different flow rates. The results show that, at
$Re$
= 100, the beads start focusing. When
$Re$
reaches 120 and above, the two kinds of beads can be separated at a distance of around 42 μm, with the channel width being 300 μm. This proves the current inertial chip has the ability to separate the particles with similar sizes based on deformability. To investigate the underlying mechanisms and optimise the separation process, we employed a set of PEG hydrogel beads as a model system and conducted a series of experimental tests.
To systematically investigate how the particle stiffness and flow condition affect the deformation and focusing of soft particles in microfluidic flow, we fabricate PEG hydrogel microparticles with similar sizes (around 30 μm) and controlled concentration adjusted from 8 % to 16 % (w/v), leading to elastic shear modulus ranging from 14.5 to 58.7 kPa (figure S3). These PEG beads serve as model particles, facilitating the investigation of the correlation of particle deformation, orientation and equilibrium focusing position with the Reynolds number and particle stiffness. To obtain clearer shape outlines after the deformation of PEG particles, the optical lens was replaced with a high-speed camera. The deformation of the PEG microparticles under different experimental conditions was recorded with Reynolds numbers ranging from 80 to 200 in increments of 20.
Experimental observation of microparticle deformation and tilt in microfluidic flow. Hydrogel microparticles are made from PEG with concentration varying from 8 % to 16 % (w/v). The Reynolds numbers of 80, 120, 160, 200 are shown for illustration. The images are taken by a high-speed camera. The PMMA beads are included for comparison. Scale bar: 10 μm.

Typical high-speed camera images of deformed hydrogel microparticles are shown in figure 2 (see figure S8 for more details). The deformation occurring within the channel as the PEG microparticles migrate to their equilibrium positions, with respect to varying particle elastic modulus and flow speed, is clearly observable. The particles exhibit an elliptical shape when viewed from the top, and as the velocity increases, the softer beads (those with lower PEG concentration) deform to a greater extent and have higher aspect ratios. Additionally, the orientation of those deformed particles (tilt angle) is also observed especially for softer ones at relatively higher Reynolds number. Moreover, the spinning of deformed particles is also observed, and this rotation occurs along the major axis (figure S7). This allows the particles to move in the direction of the flow at a constant angle, avoiding the wobbling motion reported in the literature (Alghalib et al. Reference Alghalib, Rosti and Brandt2019; Lauricella et al. Reference Lauricella, Zhou, Luan, Papautsky and Peng2022). Analysis of particle rotation across multiple frames revealed conservation of the short-axis length, indicating that particles undergo deformation to adopt a spindle morphology rather than a dish-like configuration under the imposed channel flow conditions. This consistent preservation of the short-axis dimension during rotation provides compelling evidence for the spindle-shaped deformation hypothesis.
Under deformation, the initially spherical particles transformed into a spindle-like geometry, as previously discussed. Assuming conservation of particle volume during deformation yields
where
$a_0$
is the initial diameter and
$a$
is the final length of major axis measured from experiment. Figure S6
f presents the experimental measurements of
$D_T$
and
$a$
, which shows agreement with the theoretical predictions derived from our spindle geometry assumption. This correspondence provides strong validation for the spindle-shaped deformation model.
Experimental dependence of microparticle deformation and tilt on the Reynolds and capillary numbers. (a) Variation of the Taylor deformation parameter (
$D_T$
) as a function of the Reynolds number (
$Re$
). Inset shows the outline of the deformed microparticles fitted by the general equation of an ellipse with principal semi-axes denoted by a and b, respectively (figure S6). (b) Variation of the Taylor deformation parameter (
$D_T$
) versus the capillary number (
$Ca_e$
). Symbols: experimental data; black solid line: linear fitting by
$D_T= 1.25Ca_e$
. (c) Variation of the tilt angle (
$\theta$
) versus
$Re$
. Inset illustrates the definition of
$\theta$
. (d) Variation of the tilt angle (
$\theta$
) versus
$Ca_e$
. Symbols: experimental data; black solid line: linear fitting by
$\theta = 45 - 57.325Ca_e$
. Error bars in (a–d) indicate the variation of experimental data for at least three tests.

The edge profile of the deformed particles is fitted by an elliptical function (figure S6) and measured by the Taylor deformation parameter,
$D_T=(a-b)/(a+b)$
, where a and b are the major and minor axes of the ellipse (see inset in figure 3
a). The resulting values of
$D_T$
as a function of the Reynolds number for hydrogel particles with different deformability are shown in figure 3(a). Parameter
$D_T$
is observed to increase almost linearly with
$Re$
in the range 50–200, and the slope increases with the deformability of those particles (i.e. lower PEG concentrations). To evaluate the effect of deformability of the particles under shear flow, the capillary number,
$Ca_e=\eta \dot {\gamma }/G$
, is introduced. The experimental images reveal a small
$Ca_e$
and
$D_T$
demonstrating that equation (2.2) can be applied. The plot of
$D_T$
as a function of
$Ca_e$
collapses all the experiment data in a straight line, revealing a linear dependence of
$D_T$
on
$Ca_e$
(figure 3
b). The slope of 1.25 is consistent with the linear theoretical prediction.
The orientation of deformed microparticles under different Reynolds number is also examined. The tilt angle,
$\theta$
, defined by the angle between the major axis of the deformed particle and the flow direction, is plotted as a function of
$Re$
(figure 3
c). The decreasing trend of
$\theta$
versus
$Re$
indicates the deformed particles tend to ‘lay down’ as the Reynolds number increases, resulting in a smaller tilt angle. Similar to
$D_T$
, the tilt angle changes are more pronounced for softer microparticles (with lower PEG concentration). The plot of all the experimental data of
$\theta$
versus
$Ca_e$
converges to a master straight line with a starting angle of 45
$^\circ$
(figure 3
d). The linear correlation between
$\theta$
and
$Ca_e$
also agrees with theoretical prediction by Roscoe (Reference Roscoe1967). However, the relationship between
$\theta$
and
$Ca_e$
exhibits slightly distinct slopes across varying PEG concentrations, with the master curve demonstrating subtle deviations from reference data under equivalent flow conditions (Villone & Maffettone Reference Villone and Maffettone2019). These variations can be attributed to modifications in the coefficient
$k_2$
, which arise from alterations in material parameters, particularly the elastic moduli. The concentration-dependent response suggests a systematic influence of PEG on the material properties governing particle dynamics. Through the experimental validation, we have demonstrated the accuracy of Roscoe’s linear approximation model in systems with low capillary number and monodisperse particles. The close agreement between theoretical predictions and experimental measurements demonstrates the reliability of our experimental apparatus.
To reveal how the flow condition and particle stiffness affect the inertial focusing of soft particles, typical high-speed camera images of different microparticles at their equilibrium positions under varied Reynolds number are shown in figure 4 (see more in figure S9). It is evident that the equilibrium position of soft particles shows clear dependence on the Reynolds number as well as deformability. Hydrogel microparticles with the same deformability migrate further towards the wall under higher flow rates, and, under the same flow rate, softer microparticles (with lower PEG concentration) tend to move further towards the centre.
Experimental observation of microparticle equilibrium positions in microchannels. (a) Comparison of the equilibrium positions of PEG microparticles in microfluidic flow with different Reynolds number (
$Re$
). (b) Comparison of the equilibrium positions of PEG microparticles with different concentration (‘Conc.’). Scale bars in (a,b) are 30 μm. The black line in each image indicates the position of the microfluidic wall.

We conduct inertial focusing measurements of hard particles to validate our set-up, and the experimental results are plotted in figure S10. These results were compared with works done by Segré & Silberberg (Reference Segré and Silberberg1961), Matas et al. (2004, 2009) and Asmolov (Reference Asmolov1999) that experimentally and numerically modelled the particle focusing in the differently shaped tubes. The general agreement with the numerical results in the literature validates the measurement accuracy of the experimental set-up. The discrepancy is attributed to the different tube geometries.
Parametric dependence of microparticle equilibrium position in microfluidic flow. (a) Variation of the equilibrium position (
$X_{eq}$
) of microparticles made from PEG hydrogel of different concentrations versus the Reynolds number (
$Re$
). (b) Variation of the equilibrium position (
$X_{eq}$
) versus the shear modulus (
$G$
) of the hydrogel at different Reynolds number. (c) Variation of the equilibrium position (
$X_{eq}$
) versus the capillary number (
$Ca_e$
) for different PEG hydrogel microparticles. (d) Plot of
$(1-X_{eq})/Re$
versus normalised major axis (
$a/a_0$
) of deformed microparticles made from different PEG hydrogel.

The variation of the equilibrium position of soft microparticles with the Reynolds number is examined in figure 5(a). The decreasing trend of the dimensionless equilibrium position
$X_{eq}$
(defined as
$2x_{eq}/W$
) versus
$Re$
indicates the migration of microparticles towards the wall as the Reynolds number increases (see figure 1
b). The decrease of
$X_{eq}$
versus
$G$
for all Reynolds numbers confirms the observation of deformation-induced shift of microparticles towards the centre. Furthermore,
$X_{eq}$
as a function of
$Ca_e$
is plotted in figure 5(c), demonstrating a linear relationship with
$Ca_e$
but with different slopes corresponding to the variation in the particle stiffness.
As discussed in § 2, the major axis of deformed particles (
$a/a_0$
) serves as a key indicator of the particle size under confined flow. The method for calculating
$a/a_0$
and
$X_{eq}$
from captured images is described in figure S6. The modulus (
$G$
) of different PEG microparticles and their corresponding capillary number (
$Ca_e$
) shown in figure 5(b) can be determined based on their mechanical properties and the experimental conditions, as detailed in figure S3. We observe a roughly linear dependence of the equilibrium position on the Reynolds number (figure 5
a), with larger particles tending to migrate towards the centre of the channel (
$X_{eq} \rightarrow 1$
). Figure 5(d) shows a plot of
$(1-X_{eq})/Re$
as a function of
$a/a_0$
, where all experimental data of PEG microparticles collapse onto a single master curve. This suggests a linear correlation between the equilibrium position and the major axis of the deformed microparticles in the microfluidic flow. Experimental data further support this linear correlation, as shown in figure S11
a, where the equilibrium position exhibits a clear relationship with the dimensionless major axis
$a/a_0$
. These results confirm that
$X_{eq} \propto a/a_0$
, with similar slopes for the plots of
$1-X_{eq}$
versus
$a/a_0$
, differing only in their yintercepts that correspond to varying flow speeds.
The capillary number (
$Ca_e$
), which quantifies the particle deformability under confined flow, also plays a crucial role in determining the equilibrium position. We observe a complex dependence of the focusing position on both the flow rate and particle deformability. Specifically, different slopes in the relationship between
$X_{eq}$
and
$Ca_e$
suggest that particle deformability, characterised by
$Ca_e$
, influences the focusing behaviour of the particles. Figure 5(d) illustrates the linear relationship between
$X_{eq}$
and
$a/a_0$
, and the plot of
$(1-X_{eq})/Re$
versus
$Ca_e$
shows a linear dependence, confirming that
$X_{eq}$
is influenced by
$Ca_e$
as well. Furthermore, the Taylor deformation parameter, which is correlated with
$Ca_e$
as
$D_T=1.25Ca_e$
(figure 3
b), can also be used to describe the relationship between the major axis and the capillary number. Figure S6
f reveals a nearly linear relationship between
$D_T$
and
$a/a_0$
, suggesting that
$Ca_e$
and
$a/a_0$
are highly correlated for small deformations. This relationship allows the linear function in figure 5(d) to be expressed in terms of
$Ca_e$
. The linear dependence of the equilibrium position on both Reynolds number and capillary number provides a framework for designing microchip separation systems based on sample modulus, flow rate and particle size. As shown in figure S11
b, for a rectangular channel with a width of 300 μm and a height of 100 μm, the general equation for the equilibrium position is
$X_{eq} = 1 - 0.0054Re(1 - 2.6Ca_e)$
.
To test specific applications, such as cell separation, human prostate cancer cells (PC-3, with a shear modulus of G = 287
$\pm$
52 Pa (Molter et al. (Reference Molter, Muszynski, Tao and Trivedi2022)); and LNCaP, with G = 540
$\pm$
28 Pa (Faria et al. Reference Faria, Ma, Gazi, Gardner, Brown, Clarke and Snook2008) were injected into the microchannel. These cells were diluted to 5000 cells ml−1 and pre-stained with TX-red and FITC dyes separately for better observation. A 1:1 mixture of cell solution was then injected into the channel with the same velocities. Cell separation was tested at
$Re$
= 100, 120 and 140, as shown in figure 6. The separation of the two cell lines happens at
$Re$
= 120. The similar separation behaviour observed between microparticles and cancer cells (figures 1
g, 4 and 6
b–d) indicates a significant potential of this chip in the field of cell separation and other biological applications, and highlights the potential of using deformable hydrogel microparticles to mimic the deformation and dynamics of rare target cells in microfluidic flows. The capillary number (
$Ca_e$
) of the cells was subsequently calculated using their shear moduli and the average shear rate. The inertia focusing results were compared with our PEG model with including the data for ALG beads (figure S11
c). Those ALG beads indeed follow the linear master line predicted according to the PEG model. Although a consistent trend is observed for the cells, the clear deviation from linear behaviour indicates that the PEG model is only suitable for low capillary numbers (i.e.
$Ca_e\lt 0.2$
). This highlights the need for a more comprehensive theoretical framework capable of incorporating nonlinearities and cell-specific mechanical properties.
Separation of cancer cell line samples. (a) Optical images of LNCaP (upper) and PC-3 (lower) human prostate cancer cells with similar sizes. (b–d) Experimental observation of different focusing positions of the two cell lines, PC-3 (red) and LNCaP (green), under Reynolds numbers of
$Re$
= 100, 120 and 140, respectively. Scale bars: 50 μm.

4. Conclusion
In this work, we have systematically investigated and quantitatively examined the deformation, orientation and focusing of soft microparticles in a microfluidic flow. By implementing PEG hydrogel microparticles with similar size but varied stiffness, we have experimentally demonstrated the linear correlation of particle deformation and tilt angle with the capillary number as predicted decades ago by theory. Through carefully examining the equilibrium positions of hydrogel microparticles inside microchannels, we have revealed a linear scaling of the equilibrium position with the Reynolds number and the major axis of the deformed particles. The latter is uniquely determined by the capillary number. Our current work provides valuable insight into the optimised design of microfluidic devices for precise sorting of soft particles including cells for various applications.
Supplementary materials.
Supplementary materials are available at https://doi.org/10.1017/jfm.2025.175.
Acknowledgements.
This work is supported by the National Natural Science Foundation of China (12272159), the National Program on Key Basic Research Project of China (2022YFA1203400), the Shenzhen Science and Technology Innovation Bureau (20231115094026001, KQTD20240729102052065) and the Science Foundation of Guangdong Province (2023A1515012592). Z.D. acknowledges the technical support from SUSTech CRF.
Declaration of interests.
The authors report no conflict of interest.
























