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Expression profiling of circulating miRNAs in mouse serum in response to Echinococcus multilocularis infection

Published online by Cambridge University Press:  08 March 2017

XIAOLA GUO*
Affiliation:
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, CAAS, Lanzhou 730046, Gansu, China
YADONG ZHENG*
Affiliation:
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, CAAS, Lanzhou 730046, Gansu, China Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou 225009, China
*
*Corresponding authors: State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, CAAS, 1 Xujiaping, Lanzhou 730046, Gansu, China. E-mail: guoxiaola@caas.cn or zhengyadong@caas.cn
*Corresponding authors: State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, CAAS, 1 Xujiaping, Lanzhou 730046, Gansu, China. E-mail: guoxiaola@caas.cn or zhengyadong@caas.cn

Summary

Echinococcus multilocularis is a most pathogenic zoonotic tapeworm that causes devastating echinococcosis in both humans and animals. Circulating microRNAs (miRNAs) are stably existed in the serum/plasma of mammalian hosts during helminthic infection. In this study, we compared the host-circulating miRNA expression in the sera from the E. multilocularis-infected and uninfected mice. A total of 58 host-origin serum miRNAs were differentially expressed (2 ⩾ fold change, P < 0·05), of which 21 were upregulated and 37 were significantly downregulated. Consistent with the sequencing data, quantitative polymerase chain reaction (PCR) results showed that the expression levels of four miRNAs were elevated gradually and one decreased gradually at the E. multilocularis infection time points. Moreover, seven of E. multilocularis specific miRNAs were identified in the sera. Real-time PCR analyses further demonstrated that only two parasite-derived miRNAs (emu-miR-10 and emu-miR-227) were specifically amplified in all the sera from mice infected with E. multilocularis. These findings will be helpful to understand the roles of miRNAs in host–parasite interaction and to potentiate serum miRNAs as diagnostic targets for echinococcosis.

Information

Type
Research Article
Copyright
Copyright © Cambridge University Press 2017 
Figure 0

Fig. 1. Size distribution of small RNA sequences and unique miRNAs in two libraries. (A) The size distribution of the small RNA sequences in the sera from the Echinococcus multilocularis-infected and uninfected mice; (B) The distribution of 399 unique miRNAs identified in both uninfected (left, blue circle) and infected mouse sera (right, red circle). The overlapping region indicates co-expressed unique miRNAs.

Figure 1

Table 1. Summary of known miRNA in each library

Figure 2

Fig. 2. Validation of miRNA expression by qPCR in the sera of mice infected with Echinococcus multilocularis 4-week post-infection. Data for the final analysis were from three independent experiments. The dashed horizontal line indicates the relative miRNA expression in each uninfected sera, which was set as 1·0.

Figure 3

Fig. 3. Dynamic expression of host-origin miRNAs in the sera of mice infected with Echinococcus multilocularis 4–12 weeks post-infection. miRNA expression was quantified by qRT–PCR and normalized to cel-miR-39, and fold changes were calculated as the ratio of values from infected vs uninfected mice. The relative miRNA expression in each uninfected sera was set as 1·0. Data were expressed as means ± s.d. (*P < 0·05, **P < 0·01). Data for the final analysis were from three independent experiments.

Figure 4

Fig. 4. GO molecular function annotations of the target genes of differentially expressed miRNAs. According to P value, top GO terms of biological process, molecular function and cellular component were shown, respectively.

Figure 5

Fig. 5. Detection of parasite-derived miRNAs in mouse sera during Echinococcus multilocularis infection. (A) Semi-quantitative PCR analysis of E. multilocularis-specific miRNAs identified in the infected and uninfected sera; (B) Detection of parasite-derived miRNAs in mouse sera during E. multilocularis infections. miRNAs were quantified by qRT–PCR and normalized to cel-miR-39, and fold changes were calculated as the ratio of normalized values in infected sera compared with the background in uninfected sera. A total of 15 sera samples in each group were tested and each symbol represents data from one individual mouse (*P < 0·05, *** P < 0·001).

Figure 6

Table 2. Seven parasite-derived circulating miRNAs in the Echinococcus multilocularis-infected mouse sera

Supplementary material: File

Guo and Zheng supplementary material

Tables S1-S7 and Figure S1

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