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The use of complex microbial soil communities in Mars simulation experiments

Published online by Cambridge University Press:  11 August 2008

Kai Finster
Affiliation:
Department of Biological Sciences – Microbiology, University of Aarhus, 8000 Aarhus C, Denmark e-mail: kai.finster@biology.au.dk
Aviaja A. Hansen
Affiliation:
Department of Biological Sciences – Microbiology, University of Aarhus, 8000 Aarhus C, Denmark e-mail: kai.finster@biology.au.dk
Lars Liengaard
Affiliation:
Department of Biological Sciences – Microbiology, University of Aarhus, 8000 Aarhus C, Denmark e-mail: kai.finster@biology.au.dk
Karina Mikkelsen
Affiliation:
Department of Biological Sciences – Microbiology, University of Aarhus, 8000 Aarhus C, Denmark e-mail: kai.finster@biology.au.dk
Tommy Kristoffersen
Affiliation:
Department of Biological Sciences – Microbiology, University of Aarhus, 8000 Aarhus C, Denmark e-mail: kai.finster@biology.au.dk
Jonathan Merrison
Affiliation:
Department of Physics and Astronomy, University of Aarhus, 8000 Aarhus C, Denmark
Per Nørnberg
Affiliation:
Department of Earth Sciences, University of Aarhus, 8000 Aarhus C, Denmark
Bente Aa. Lomstein
Affiliation:
Department of Biological Sciences – Microbiology, University of Aarhus, 8000 Aarhus C, Denmark e-mail: kai.finster@biology.au.dk
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Abstract

Mars simulation studies have in the past mainly investigated the effect of the simulation conditions such as UV radiation, low pressure and temperature on pure cultures and much has been learnt about the survival potential of sporeformers such as Bacillus subtilis. However, this approach has limitations as the studies only investigate the properties of a very limited number of microorganisms. In this paper we propose that Mars simulations should be carried out with complex microbial communities of Martian analogues such as permafrost or the deep biosphere. We also propose that samples from these environments should be studied by a number of complementary methods and claim that these methods in combination can provide a comprehensive picture of how imposed Martian conditions affect the microbial community and in particular the survival of its constituents – microbes as well as biological material in general. As an interesting consequence this approach can lead to the isolation of bacteria, which are more recalcitrant to the imposed Martian conditions than the pure cultures that have previously been studied.

Information

Type
Research Article
Copyright
Copyright © 2008 Cambridge University Press
Figure 0

Fig. 1. Compilation of Mars simulation experiments that were carried out within the last 50 years.

Figure 1

Fig. 2. Toolbox of methods for the evaluation of the effect of Mars simulation conditions on a microbial soil community.

Figure 2

Fig. 3. Ecolog™ plate that was inoculated with iron-rich beech forest soil that was used as a Martian analogue. Soil microbes produce the red colour that developed in some wells by reduction of an added sodium tetrazolium salt.

Figure 3

Fig. 4. R2A agar plate inoculated with a complex microbial soil community. The different colony morphologies are produced by different bacterial strains.

Figure 4

Fig. 5. Denaturant gradient gel electrophoresis (DGGE) gel. Different lanes show patterns of genetic diversity from different dilution steps. Each black band on the gel originates from an approximately 600 base pair long sequence of a 16 S rDNA gene. After separation on the gel selected bands were cut out and the sequences of the rDNA molecules were obtained. The names on the right-hand side of the gel are the names of the microbial strains whose sequences were most closely related to the sequences determined form material that was cut out of the gel. The closest relative was found by comparison of the obtained sequences with sequences stored in the GenBank database.