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A novel polymorphism in the oxytocin receptor encoding gene (OXTR) affects milk fatty acid composition in Italian Mediterranean river buffalo

Published online by Cambridge University Press:  19 May 2017

Gianfranco Cosenza*
Affiliation:
Department of Agricultural Sciences, University of Naples ‘Federico II’, Portici, NA, Italy
Nicolò P P Macciotta
Affiliation:
Department of Agricultural Sciences, University of Sassari, Sassari, Italy
Anna Nudda
Affiliation:
Department of Agricultural Sciences, University of Sassari, Sassari, Italy
Angelo Coletta
Affiliation:
Italian National Association of Buffalo Breeders (ANASB), Località Centurano, Caserta, Italy
Luigi Ramunno
Affiliation:
Department of Agricultural Sciences, University of Naples ‘Federico II’, Portici, NA, Italy
Alfredo Pauciullo
Affiliation:
Department of Agricultural, Forest and Food Science, University of Torino, Grugliasco, TO, Italy
*
*For correspondence; e-mail: giacosen@unina.it
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Abstract

The oxytocin receptor, also known as OXTR, is a protein which functions as receptor for the hormone and neurotransmitter oxytocin and the complex oxytocin–oxytocin receptor plays an important role in the uterus during calving. A characterisation of the river buffalo OXTR gene, amino acid sequences and phylogenetic analysis is presented. The DNA regions of the OXTR gene spanning exons 1, 2 and 3 of ten Mediterranean river buffalo DNA samples were analysed and 7 single nucleotide polymorphisms were found. We focused on the g.129C > T SNP detected in exon 3 and responsible for the amino acid replacement CGCArg > TGCCys in position 353. The relative frequency of T allele was of 0·257. An association study between this detected polymorphism and milk fatty acids composition in Italian Mediterranean river buffalo was carried out. The fatty acid composition traits, fatty acid classes and fat percentage of 306 individual milk samples were determined. Associations between OXTR g.129C > T genotype and milk fatty acids composition were tested using a mixed linear model. The OXTR CC genotype was found significantly associated with higher contents of odd branched-chain fatty acids (OBCFA) (P < 0·0006), polyunsaturated FA (PUFA n 3 and n 6) (P < 0·0032 and P < 0·0006, respectively), stearic acid (C18) (P < 0·02) and lower level of palmitic acid (C16) (P < 0·02). The results of this study suggest that the OXTR CC animals might be useful in selection toward the improvement of milk fatty acid composition.

Information

Type
Research Article
Copyright
Copyright © Proprietors of Journal of Dairy Research 2017 
Figure 0

Table 1. Oligonucleotide primers sequence and positions

Figure 1

Fig. 1. Alignment of the assembled Italian Mediterranean buffalo OXTR exonic sequences (present study) with sequences available in EMBL related to the Indian buffalo OXTR cDNA (FJ917398), Italian Mediterranean buffalo OXTR cDNA (KI418690·1), non-annotated genomic bubaline sequence (NW_005785401·1) and genomic DNA (XM_006070767). Alignment was performed using DNAsis pro Software v2.0 (Hitachi). The sites of exon-exon junctions are underlined. In bold type the portion of exon 1 that appears to be differentially spliced in the bovine (exon 1a). Dashes indicate identical nucleotides. The stop codon is symbolised by *. Amino acid numbering is relative to the first aminoacid (Met) of the deduced encoded protein.

Figure 2

Fig. 2. Comparison of protein-coding regions of the water buffalo OXTR with cattle, yak, sheep, bison, orca, minke whale, giant panda, dog, cat, pig, human, rat, flying fox, rabbit and cape golden mole. Accession numbers of sequences compared are shown in the figure. Dashes (–) indicate the identical amino acid residues. Amino acids full matching the buffalo sequence of the present work are shown as shaded. The protein portion corresponding to the 7 transmembrane receptor (rhodopsin family) is underlined, whereas the transmembrane (TM) domains are indicated by asterisks (*).

Figure 3

Fig. 3. Phylogenetic relationship of the peptide sequence of Italian water buffalo (Bubalus bubalis) OXTR with other 14 peptide/protein sequences reported in different mammals. The MEGA v4.0 program was used to reconstruct a phylogenetic tree. Bootstrap values are indicated.

Figure 4

Table 2. Average fat content (%), fatty acid composition (%) and fatty acid classes (%) of 306 dairy buffaloes milk samples measured in 14 herd located in Southern Italy

Figure 5

Table 3. Genotyping data, allele frequency, relative frequencies of buffalo cows of the SNP g.129C > T at the exon 3 of the OXTR gene in Mediterranean river buffalo population

Figure 6

Table 4. Least squares Means of the SNP g.129C > T genotypes at the exon 3 of the OXTR gene for some FA, estimation of average substitution effects (α) of a thymine for a cytosine, and contribution of the polymorphism to the phenotypic variance (r2)