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Population structure of the fireworm Hermodice carunculata in the wider Caribbean, Atlantic and Mediterranean Sea

Published online by Cambridge University Press:  08 February 2023

Mariel A. Cruz Ramos
Affiliation:
Department of Marine Sciences, University of Puerto Rico at Mayagüez, Call Box 9000, Mayagüez, PR 00681, USA
Nikolaos V. Schizas*
Affiliation:
Department of Marine Sciences, University of Puerto Rico at Mayagüez, Call Box 9000, Mayagüez, PR 00681, USA
*
Author for correspondence: Nikolaos V. Schizas, E-mail: nikolaos.schizas@upr.edu
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Abstract

The bearded fireworm Hermodice carunculata is a conspicuous omnivorous benthic invertebrate distributed in the wider Atlantic Ocean, Mediterranean Sea and the Red Sea. Questions were raised in the past regarding the taxonomic status of amphiatlantic fireworm specimens but subsequent analysis of morphological data with new molecular data reconfirmed the presence of only one species, H. carunculata with amphiatlantic distribution. Hermodice carunculata has been the subject of several taxonomic and genetic studies but there are still questions regarding the genetic diversity and population structure of the species throughout its range. We contributed to the genetic studies of H. carunculata with ~200 new samples from over 20 locations in the Caribbean, Eastern Atlantic Ocean and the Mediterranean Sea. We sequenced the mitochondrial markers Cytochrome c oxidase Subunit I (COI) and Cytochrome b (Cytb) from each polychaete to examine the patterns of genetic diversity of H. carunculata. Our data revealed a significant population structure between the Caribbean H. carunculata including those from Brazil compared with those from the eastern Atlantic (Tenerife, Canary Islands) and eastern Mediterranean (Greece and Malta). We inferred rates of gene flow between eastern and western Atlantic populations by estimating the bidirectional effective migration rate (Nem). We corroborate previous studies indicating the existence of one species with genetically distinct populations. However, the biological significance of the observed population divergence should be evaluated with cross-breeding experiments.

Information

Type
Research Article
Copyright
Copyright © The Author(s), 2023. Published by Cambridge University Press on behalf of Marine Biological Association of the United Kingdom
Figure 0

Fig. 1. Map with locations denoted with asterisks indicating the geographic spread of samples used in this study. Detailed information on the origin of samples is listed in Table 1.

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Table 1. Number of DNA sequences of COI by geographic location used in this study

Figure 2

Fig. 2. Median-joining network based on COI haplotypes of Hermodice carunculata from the Caribbean, Brazil, Tenerife and the Mediterranean. The haplotypes are based on sequences generated in this study (GenBank accession # MF001520–- MF001715), as well as those from Ahrens et al. (2013; GenBank accession # KC017475-KC017594) and from Chatzigeorgiou et al. (2014; GenBank accession # KF878397-KF878476). The network was estimated with the median-joining network algorithm in PoPArt with epsilon = 0. Colours indicate the geographic origin of sequences, each circle is a different haplotype and the size of circles is proportional to the number of fireworms sharing this haplotype.

Figure 3

Fig. 3. Median-joining network based on Cytb haplotypes of Hermodice carunculata from the Caribbean, Tenerife and Mediterranean. The haplotypes are based on sequences generated in this study (GenBank accession # MF001716–- MF001913). The network was estimated with the median-joining network algorithm in PoPArt with epsilon = 0. Colours indicate the geographic origin of sequences, each circle is a different haplotype and the size of circles is proportional to the number of fireworms sharing this haplotype.

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Table 2. Genetic diversity and summary statistics of Hermodice carunculata based on COI sequences

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Table 3. Genetic diversity and summary statistics of Hermodice carunculata based on Cytb sequences

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Fig. 4. Maximum likelihood consensus tree based on 195 COI haplotype sequences of Hermodice carunculata. Phylogenetic analysis was conducted with RAxML-ng as implemented in raxmlGUI 2.0. Tree was re-rooted at mid-point in iTol v6. Branches in red indicate haplotypes from the Caribbean and Brazil whereas branches in blue indicate haplotypes from the Mediterranean and Tenerife. Haplotypes 1, 45, 54, 100, 170 and 172 (in bold blue) include specimens from Mediterranean and Tenerife but are clustered with Caribbean and Brazilian specimens. Numbers above branches indicate bootstrap transfer values (only >70% values are depicted for clarity). BR, Brazil; BR CAR, shared haplotype between Caribbean and Brazil.

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Table 4. Analysis of molecular variance (AMOVA) of Hermodice carunculata based on COI sequences between the western and eastern Atlantic populations

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Table 5. Analysis of molecular variance (AMOVA) of Hermodice carunculata based on Cytb sequences

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Table 6. A comparison of pairwise population differentiation of Hermodice carunculata based on COI sequences corrected by the Kimura 2-Parameter distance

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Table 7. Average sequence divergence (%) between and within locations based on COI sequences as estimated in MEGA v. 11

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Table 8. Average sequence divergence (%) between and within locations based on Cytb sequences as estimated in MEGA v. 11

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