The gut–liver axis represents a bidirectional communication network for maintaining metabolic and immunological homoeostasis. Alterations in this axis allow bacterial products to reach the liver via the portal vein, promoting inflammation, oxidative stress and lipid accumulation. In this scenario, the consumption of bioactive compounds has become prominent due to its antioxidant and anti-inflammatory effects. This study aimed to investigate the effects of camu-camu (Myrciaria dubia) extract, an Amazonian fruit rich in phenolic compounds, on intestinal morphology, barrier-related gene expression and hepatic outcomes of chicken (Gallus gallus) embryos exposed to dextran sulfate sodium (DSS). Fertile eggs were divided into three groups (n 20/group): water (control), DSS (1·5 %), and camu-camu (10 %) + DSS (1·5 %). On the seventeenth day of embryonic development, treatments were injected into the amniotic fluid, and samples were collected at hatching (twenty-first day). Results showed that camu-camu was associated with changes in intestinal histomorphology, increasing villus height, surface area and the number of goblet cells, along with increased expression of selected barrier-related genes (MUC2, CLDN-1 and ZO-2). In the liver, camu-camu significantly reduced NF-κB expression compared with the DSS and water-treated groups, consistent with modulation of inflammatory-related gene expression. Furthermore, the decreased expression of iNOS, CAT and SOD-1 indicates modulation of oxidative stress-related gene expression markers. Histological analysis indicated alterations in hepatic morphology, including reduced lipid droplets and inflammatory infiltrates. These findings indicate that camu-camu is associated with changes in intestinal histomorphology, selected barrier-related gene expressions, hepatic histology and inflammatory- and oxidative stress-related gene expression markers.